@ahamed, there would be an issue if $16=0, also there was an issue with BSD awk which did not print everything.. Rearranging your script like this, worked though:
This User Gave Thanks to Scrutinizer For This Post:
Hi all,
I have a huge csv file with the following format of data,
Num SNPs, 549997
Total SNPs,555352
Num Samples, 157
SNP, SampleID, Allele1, Allele2
A001,AB1,A,A
A002,AB1,A,A
A003,AB1,A,A
...
...
...
I would like to write out a list of unique SNP (column 1). Could you... (3 Replies)
Hi All,
I have a file which is having 3 columns as (string string integer)
a b 1
x y 2
p k 5
y y 4
.....
.....
Question:
I want get the unique value of column 2 in a sorted way(on column 2) and the sum of the 3rd column of the corresponding rows. e.g the above file should return the... (6 Replies)
I have a text file where the second column is a list of numbers going from small to large. I want to extract the rows where the second column is smaller than or equal to 0.0001.
My input:
rs10082730 9e-08 12 46002702
rs2544081 1e-07 12 46015487
rs1425136 1e-06 7 35396742
rs2712590... (1 Reply)
I have a space delimited text file. I want to extract rows where the third column has 0 as a value and write those rows into a new space delimited text file. How do I go about doing that? Thanks! (2 Replies)
I have a file containing data like so:
2012-01-02 GREEN 4
2012-01-02 GREEN 6
2012-01-02 GREEN 7
2012-01-02 BLUE 4
2012-01-02 BLUE 3
2012-01-02 GREEN 4
2012-01-02 RED 4
2012-01-02 RED 8
2012-01-02 GREEN 4
2012-01-02 YELLOW 5
2012-01-02 YELLOW 2
I can't always predict what the... (4 Replies)
Hi all,
I am new to shell script.I need your help to write a shell script.
I need to write a shell script to extract data from a .csv file where columns are ',' separated.
The file has 5 columns having values say column 1,column 2.....column 5 as below along with their valuesm.... (3 Replies)
cat sample.csv
ID,Name,no
1,AAA,1
2,BBB,1
3,AAA,1
4,BBB,1
cut -d',' -f2 sample.csv | sort | uniq
this gives only the 2nd column values
Name
AAA
BBB
How to I get all the columns of CSV along with this? (1 Reply)
Hi would like to ask you guys any advise regarding my problem
I have this kind of data
file.txt
111111111,20
111111111,50
222222222,70
333333333,40
444444444,10
444444444,20
I need to get this
file1.txt
111111111,70
222222222,70
333333333,40
444444444,30
using this code I can... (6 Replies)
Hi All,
Does anyone have any suggestions/examples of how i could show only lines where the first field is not duplicated. If the first field is listed more than once it shouldnt be shown even if the other columns make it unique.
Example file :
876,RIBDA,EC2
876,RIBDH,EX7
877,RIBDF,E28... (4 Replies)
What is an efficient way of counting the number of unique values in a 400 column by 1000 row array and outputting the counts per column, assuming the unique values in the array are:
A, B, C, D
In other words the output should look like: Value COL1 COL2 COL3
A 50 51 52... (16 Replies)
Discussion started by: Geneanalyst
16 Replies
LEARN ABOUT CENTOS
repo-rss
repo-rss(1)repo-rss(1)NAME
repo-rss - generates an RSS feed from one or more Yum repositories
SYNOPSIS
repo-rss [options] repoid1 [repoid2...]
DESCRIPTION
repo-rss is a program for generating RSS feeds for one or more Yum repositories.
GENERAL OPTIONS -h, --help
Help; display a help message and then quit.
-f <file>
Specify the file to which the RSS will be written. Default is repo-rss.xml.
-l <link>
Specify the URL to the RSS feed. Default is http://yum.baseurl.org/.
-t <title>
Specify the title for the RSS feed. Default is "RSS Repository - Recent Packages".
-d <description>
Specify the description of the RSS feed. Default is "Most recent packages in Repositories".
-r <days>
Specify the number of days to consider most recent. Default is 3.
--tempcache
Enable the use of a temporary directory for the yum cache. This is enabled by default for non-root users.
EXAMPLES
Generate an RSS for the updates-released repository and save it as updates-release.xml:
repo-rss -f updates-released.xml updates-released
FILES
As repo-rss uses YUM libraries for retrieving all the information, it relies on YUM configuration for its default values like which reposi-
tories to use. Consult YUM documentation for details:
/etc/yum.conf
/etc/yum/repos.d/
/var/cache/yum/
SEE ALSO
yum.conf (5)
http://yum.baseurl.org/
AUTHORS
See the Authors file included with this program.
BUGS
There are of course no bugs, but should you find any, you should first consult the FAQ section on http://yum.baseurl.org/wiki/Faq and if
unsuccessful in finding a resolution contact the mailing list: yum-devel@lists.baseurl.org. To file a bug use http://bugzilla.redhat.com
for Fedora/RHEL/Centos related bugs and http://yum.baseurl.org/report for all other bugs.
Seth Vidal 2005 repo-rss(1)