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Top Forums Shell Programming and Scripting Print sequences from file2 based on match to, AND in same order as, file1 Post 302891949 by pamu on Monday 10th of March 2014 03:25:52 AM
Old 03-10-2014
Code:
awk 'NR==FNR{B=$0;getline;A[B]=$0;next} {D=">"$0; print D;print A[D]}' file2 file1

>EN_comp12952_c0_seq3:367-1668
MDKRLLNVSLLGLAFMFVFTAFQTMGNIEKTILKSIQNDYPSFTGDGYTSL
>ES_comp17168_c1_seq6:1-864
IFELTVVVSFAGSRLAMFIGACCYTMFLVSFLWPTTFLLYFMSAVIGFGASVIWT
>EN_comp13395_c3_seq14:231-1088
KMTSPTSSVIRAAVLQLSVSTDKSANIAIAVKRIQQAKSNGCTLAVLPECFTTPY
>ES_comp17836_c2_seq2:2-862
RKMTSPTSSVIRAAVLQLSVSTDKSTNIAIAVKRIQQAKSNGCTLAVLPECFTTPY

 

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mencal(1)								 1								 mencal(1)

NAME
mencal - menstruation calendar SYNOPSIS
mencal [options] [file1 file2 ... -c CONF1 -c CONF2 ...] DESCRIPTION
Display options: -m, --monday draw monday as first weekday (sunday is default) -1 current month (default) -3 previous, current and next month -y [YYYY] all-year calendar (default YYYY is current year) -q, --quiet no top information will be printed -n, --nocolor noncolored output -i, --icolor COLOR intersection color (default red) available colors: red, green, blue, yellow, violet, cyan, shiny, bold mencal configuration: -c, --config s=[YYYY]MMDD,l=LL,d=DD,n=NAME,f=FILE,c=COLOR The second argument is a comma separated list of options. No spaces are allowed in this list. If no name is specified, 'Unknown' is used. Various -c options or filenames can be set. s,start=[YYYY]MMDD start day of period (default current day) l,length=LL length of period in days (default 28) d,duration=D duration of menstruation in days (default 4) n,name=NAME name of subject f,file=FILE filename to save configuration to (see section FILES) only menstruation related variables will be saved c,color=COLOR color used for menstruation days available colors: red, green, blue, yellow, violet, cyan, shiny, bold default color is red, with '-n' switch color settings are ignored Info options: -h, --help print help -V, --version print version information FILES
: $HOME/.mencalrc - the default configuration file that is automatically loaded AUTHOR
: (C) 2002 C. McCohy e-mail: <mccohy@kyberdigi.cz> Word-Wide-Web: http://www.kyberdigi.cz/projects/mencal/english This manual page was written for the Debian GNU/Linux distribution because the original program does not have a manual page (but may be used by others). HISTORY
22 March 2002 - Originally written by Amaya Rodrigo <amaya@debian.org>. 24 Apr 2002 - New manpage contributed by Pablo S. Torralba <psanchez@skyrealms.org>. Amaya Rodrigo <amaya@debian.org> is now responsible for developing and maintaining this manual page. Comments and suggestions are greatly wellcome. mencal Menstruation calendar mencal(1)
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