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Shell Programming and Scripting
How to extract specific data?
Post 302891234 by RudiC on Tuesday 4th of March 2014 01:25:18 PM
03-04-2014
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My input:
>seq_1
DSASSTRRARRRRTPRTPSLRSRRSDVTCS
>seq_3
RMRLRRWRKSCSERS*RRSN
>seq_8
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>seq_10
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QVQHRRHDHSRTQH*LCRRRQREDCDRLHR
>seq_4
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My input:
Data name: ABC001
Data length: 1000
Detail info
Data Direction Start_time End_time Length
1 forward 10 100 90
1 forward 15 200 185
2 reverse 50 500 450
Data name: XFG110
Data length: 100
Detail info
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Input file:
#abc_1
SAASFASFGGDSGDSGDSGSDGSDGSDGSDGSDGSDGSDGDS
Output file:
FASFGGDSGDS
I just want to print out the read from position 5 until position 15 from the data.
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Input:
HS04636 PROGRAM source 836 7001 + ID=g1
HS04636 PROGRAM beginner 836 7001 + ID=g1.t1;Parent=g1
HS04636 PROGRAM position 836 836 + Parent=g1.t1
HS04636 PROGRAM type 836 1017 + Parent=g1.t1
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LEARN ABOUT DEBIAN
mtp_libmtp_folder_struct
LIBMTP_folder_struct(3) libmtp LIBMTP_folder_struct(3) NAME
libmtp - LIBMTP_folder_struct SYNOPSIS
#include <libmtp.h> Data Fields uint32_t folder_id uint32_t parent_id uint32_t storage_id char * name LIBMTP_folder_t * sibling LIBMTP_folder_t * child Detailed Description MTP Folder structure Examples: delfile.c, folders.c, getfile.c, newfolder.c, sendfile.c, and sendtr.c. Field Documentation LIBMTP_folder_t* LIBMTP_folder_struct::child Child folder or NULL if no children Examples: folders.c. Referenced by LIBMTP_destroy_folder_t(), LIBMTP_Find_Folder(), and LIBMTP_Get_Folder_List_For_Storage(). uint32_t LIBMTP_folder_struct::folder_id Unique folder ID Examples: folders.c. Referenced by LIBMTP_Find_Folder(), LIBMTP_Get_Folder_List_For_Storage(), LIBMTP_new_folder_t(), and LIBMTP_Set_Folder_Name(). char* LIBMTP_folder_struct::name Name of folder Examples: folders.c. Referenced by LIBMTP_destroy_folder_t(), LIBMTP_Get_Folder_List_For_Storage(), and LIBMTP_Set_Folder_Name(). uint32_t LIBMTP_folder_struct::parent_id ID of parent folder Referenced by LIBMTP_Get_Folder_List_For_Storage(). LIBMTP_folder_t* LIBMTP_folder_struct::sibling Next folder at same level or NULL if no more Examples: folders.c. Referenced by LIBMTP_destroy_folder_t(), LIBMTP_Find_Folder(), and LIBMTP_Get_Folder_List_For_Storage(). uint32_t LIBMTP_folder_struct::storage_id ID of storage holding this folder Referenced by LIBMTP_Get_Folder_List_For_Storage(). Author Generated automatically by Doxygen for libmtp from the source code. Version 1.1.3 Sun Feb 17 2013 LIBMTP_folder_struct(3)