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Top Forums UNIX for Dummies Questions & Answers [Solved] Matching and transposing Post 302887578 by zajtat on Sunday 9th of February 2014 03:38:01 AM
Old 02-09-2014
[Solved] Matching and transposing

Hi,

I've got two files.

files one:

HTML Code:
AAMP	2:219129783:A:G	
 AAMP	2:219129896:A:G	
 AAMP	2:219130802:T:C	
 AANAT	17:74464865:T:G	
 AANAT	17:74464914:A:G	
 AANAT	17:74464920:T:C

file 2:
HTML Code:
AAMP
AANAT
I need to create the following file:

HTML Code:
AAMP	2:219129783:A:G  2:219129896:A:G  2:219130802:T:C	
 AANAT	17:74464865:T:G	 17:74464914:A:G 17:74464920:T:C
[

Basically, the first column of file one is matched to first column of file two and all the lines of file one matching column one in file 2 are then transposed and printed in one line, next to the first column of file two.

I am afraid my awk knowledge is not enough to solve this one.
If anyone can offer a solution, I would very very grateful!!!!

Many thanks for your time and help in advance!
 

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HTML::HTML5::Parser::Error(3pm) 			User Contributed Perl Documentation			   HTML::HTML5::Parser::Error(3pm)

NAME
HTML::HTML5::Parser::Error - an error that occured during parsing DESCRIPTION
Note that HTML::HTML5::Parser is not a validation tool, and there are many classes of error that it does not care about, so will not raise. The "error_handler" and "errors" methods of "HTML::HTML5::Parser" generate "HTML::HTML5::Parser::Error" objects. "HTML::HTML5::Parser::Error" overloads stringification, so can be printed, matched against regular expressions, etc. Constructor "new(level=>$level, type=>$type, token=>$token, ...)" Constructs a new "HTML::HTML5::Parser::Error" object. Methods "level" Returns the level of error. ('MUST', 'SHOULD', 'WARN', 'INFO' or undef.) "layer" Returns the parsing layer involved, often undef. e.g. 'encode'. "type" Returns the type of error as a string. "tag_name" Returns the tag name (if any). "source_line" ($line, $col) = $error->source_line(); $line = $error->source_line; In scalar context, "source_line" returns the line number of the source code that triggered the error. In list context, returns a line/column pair. (Tab characters count as one column, not eight.) "to_string" Returns a friendly error string. SEE ALSO
HTML::HTML5::Parser. AUTHOR
Toby Inkster, <tobyink@cpan.org> COPYRIGHT AND LICENSE
Copyright (C) 2011-2012 by Toby Inkster This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.1 or, at your option, any later version of Perl 5 you may have available. perl v5.14.2 2012-03-19 HTML::HTML5::Parser::Error(3pm)
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