02-09-2014
[Solved] Matching and transposing
Hi,
I've got two files.
files one:
HTML Code:
AAMP 2:219129783:A:G
AAMP 2:219129896:A:G
AAMP 2:219130802:T:C
AANAT 17:74464865:T:G
AANAT 17:74464914:A:G
AANAT 17:74464920:T:C
file 2:
I need to create the following file:
HTML Code:
AAMP 2:219129783:A:G 2:219129896:A:G 2:219130802:T:C
AANAT 17:74464865:T:G 17:74464914:A:G 17:74464920:T:C
[
Basically, the first column of file one is matched to first column of file two and all the lines of file one matching column one in file 2 are then transposed and printed in one line, next to the first column of file two.
I am afraid my awk knowledge is not enough to solve this one.
If anyone can offer a solution, I would very very grateful!!!!
Many thanks for your time and help in advance!
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LEARN ABOUT DEBIAN
html::html5::parser::error
HTML::HTML5::Parser::Error(3pm) User Contributed Perl Documentation HTML::HTML5::Parser::Error(3pm)
NAME
HTML::HTML5::Parser::Error - an error that occured during parsing
DESCRIPTION
Note that HTML::HTML5::Parser is not a validation tool, and there are many classes of error that it does not care about, so will not raise.
The "error_handler" and "errors" methods of "HTML::HTML5::Parser" generate "HTML::HTML5::Parser::Error" objects.
"HTML::HTML5::Parser::Error" overloads stringification, so can be printed, matched against regular expressions, etc.
Constructor
"new(level=>$level, type=>$type, token=>$token, ...)"
Constructs a new "HTML::HTML5::Parser::Error" object.
Methods
"level"
Returns the level of error. ('MUST', 'SHOULD', 'WARN', 'INFO' or undef.)
"layer"
Returns the parsing layer involved, often undef. e.g. 'encode'.
"type"
Returns the type of error as a string.
"tag_name"
Returns the tag name (if any).
"source_line"
($line, $col) = $error->source_line();
$line = $error->source_line;
In scalar context, "source_line" returns the line number of the source code that triggered the error.
In list context, returns a line/column pair. (Tab characters count as one column, not eight.)
"to_string"
Returns a friendly error string.
SEE ALSO
HTML::HTML5::Parser.
AUTHOR
Toby Inkster, <tobyink@cpan.org>
COPYRIGHT AND LICENSE
Copyright (C) 2011-2012 by Toby Inkster
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.1 or,
at your option, any later version of Perl 5 you may have available.
perl v5.14.2 2012-03-19 HTML::HTML5::Parser::Error(3pm)