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Shell Programming and Scripting
Sum up numbers in a for loop
Post 302887283 by Corona688 on Thursday 6th of February 2014 03:50:47 PM
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1. Shell Programming and Scripting
Hi,
i want to sum all nubers in one column. Example:
12.23
11
23.01
3544.01
I'm trying to do this in awk, but it doesn't work properly.
Seems like awk is summing only integers, for example:
12
11
23
3544
It cuts off numbers after dot.
I used this command:
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hello im looking for short way to sum numbers from stdout the way i found to do it is to long for me i wander if there is shorter way to do it
ok it 2 stage action
this will make the list of number in to file sum.txt
grep -c include *.c | awk '{l=split($0,a,":");print a;}' > sum.txt
this... (1 Reply)
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I have a command which returns some numbers as follows:
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36864
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73728
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114688
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Hi
I am writing a script that will produce the total of the digits with in the number. Here is the script.
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if
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cat *.out |grep "<some text>" | awk '{print $6}'
For ex,This will reutrn me
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22222
is it possible to add these two numbers in the above given command itself?I can write this to a file and find the sum.
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I basically have a file where I had to do a bunch of greps to get a list of numbers
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Hi All,
I need to print the sum of numbers from different files.
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I have files :
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Need help in coding:
File with several rows incl. numbers like
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...
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LEARN ABOUT DEBIAN
fastx_quality_stats
FASTX_QUALITY_STATS(1) User Commands FASTX_QUALITY_STATS(1) NAME
fastx_quality_stats - FASTX Statistics DESCRIPTION
usage: fastx_quality_stats [-h] [-N] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit 0.0.13.2 by A. Gordon (gordon@cshl.edu) [-h] = This helpful help screen. [-i INFILE] = FASTQ input file. default is STDIN. [-o OUTFILE] = TEXT output file. default is STDOUT. [-N] = New output format (with more information per nucleotide/cycle). The *OLD* output TEXT file will have the following fields (one row per column): column = column number (1 to 36 for a 36-cycles read solexa file) count = number of bases found in this column. min = Lowest quality score value found in this column. max = Highest quality score value found in this column. sum = Sum of quality score values for this column. mean = Mean quality score value for this column. Q1 = 1st quartile quality score. med = Median quality score. Q3 = 3rd quartile quality score. IQR = Inter-Quartile range (Q3-Q1). lW = 'Left-Whisker' value (for boxplotting). rW = 'Right-Whisker' value (for boxplotting). A_Count = Count of 'A' nucleotides found in this column. C_Count = Count of 'C' nucleotides found in this column. G_Count = Count of 'G' nucleotides found in this column. T_Count = Count of 'T' nucleotides found in this column. N_Count = Count of 'N' nucleo- tides found in this column. max-count = max. number of bases (in all cycles) The *NEW* output format: cycle (previously called 'column') = cycle number max-count For each nucleotide in the cycle (ALL/A/C/G/T/N): count = number of bases found in this column. min = Lowest quality score value found in this column. max = Highest quality score value found in this column. sum = Sum of quality score values for this column. mean = Mean quality score value for this column. Q1 = 1st quartile quality score. med = Median quality score. Q3 = 3rd quartile quality score. IQR = Inter-Quartile range (Q3-Q1). lW = 'Left-Whisker' value (for boxplotting). rW = 'Right-Whisker' value (for boxplotting). SEE ALSO
The quality of this automatically generated manpage might be insufficient. It is suggested to visit http://hannonlab.cshl.edu/fastx_toolkit/commandline.html to get a better layout as well as an overview about connected FASTX tools. fastx_quality_stats 0.0.13.2 May 2012 FASTX_QUALITY_STATS(1)