Hello,
How to execute a call back function after aio_write() or aio_read() in Sun Solaris 5.7?
I have filled the control block struct aiocb as follows:
aio_sigevent.sigev_signo = SIGEV
aio_sigevent.sigev_notify = SIGEV_THREAD
Then I have filled the call back function in ... (0 Replies)
Hi all,
I have to move all the files in a tree directory structure to a single directory. Inorder to know which file is from which directory , i'll have to add the name of the directory to the file name. For this i wrote a recursive function which is as follows... (4 Replies)
Hi, i have a question:
i build this function:
function WriteLog {
....
...
print $*
print $* >> FileLog
....
....
}
the function are called with this sintax:
.....
..... (8 Replies)
Need an extra set of eyes. Can't find function. Can someone help, please. Thanks
echo " Is this the correct list of tapes to eject (y/n)?"
read option
echo $option
case $option in
y|Y) TAPE_ROUTINE;;
... (3 Replies)
Hi All,
I have a function which reads parameter and gets the value from config file.
The entry in the file can be either of two
Name=value or
Name=value
so if the variant is not present it should return me the generic value ie Name without variant.
I am first searching for variant in... (4 Replies)
Hello all,
I'm attempting to sent an e-mail with the following funtion in my script. The tested that the logic is correct with another native os command, but I can't seem to get mail to work. I played with the "", just can't seem to get it right. Any ideas? Thanks.
$my_mail = `mail... (4 Replies)
Hi,
I had a scripts which calls two function. One function will call another function, script is working fine but the second function is not calling the first function. Below is the script
#!/usr/bin/ksh
fun1() {
echo $DATETIME >> Test1.ksh
return 0
}
fun2() {
typeset DATETIME=`date... (5 Replies)
I created two functions that output two random variables. I want to output them in the output file. But it does not seem to work.
# Function rgaussian1(r1, r2)
# Gaussian random number generator
function rgaussian1(r1, r2) {
pi = 3.142
v1 = sqrt( -2 * log(rand()) )
v2... (18 Replies)
I am trying to figure out why I am having a "problem" with some functions in a bash script I am running. The reason for air quoting is that the functions are working, they are just not displaying anything to screen when called from another function. Here's an example:
function Create_Input
{... (6 Replies)
Discussion started by: dagamier
6 Replies
LEARN ABOUT DEBIAN
bio::treeio::svggraph
Bio::TreeIO::svggraph(3pm) User Contributed Perl Documentation Bio::TreeIO::svggraph(3pm)NAME
Bio::TreeIO::svggraph - A simple output format that converts a Tree object to an SVG output
SYNOPSIS
use Bio::TreeIO;
my $in = Bio::TreeIO->new(-file => 'input', -format => 'newick');
my $out = Bio::TreeIO->new(-file => '>output', -format => 'svggraph');
while( my $tree = $in->next_tree ) {
my $svg_xml = $out->write_tree($tree);
}
DESCRIPTION
This outputs a tree as an SVG graphic using the SVG::Graph API
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Brian OConnor
Email brian.oconnor-at-excite.com
CONTRIBUTORS
Allen Day Guillaume Rousse, Guillaume-dot-Rousse-at-inria-dot-fr
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
new
Title : new
Usage : my $obj = Bio::TreeIO::svggraph->new();
Function: Builds a new Bio::TreeIO::svggraph object
Returns : Bio::TreeIO::svggraph
Args :-width => image width (default 1600)
-height => image height (default 1000)
-margin => margin (default 30)
-stroke => stroke color (default 'black')
-stroke_width=> stroke width (default 2)
-font_size=> font size (default '10px')
-nomalize => undef or 'log' (default is undef)
write_tree
Title : write_tree
Usage : $treeio->write_tree($tree);
Function: Write a tree out to data stream in newick/phylip format
Returns : none
Args : Bio::Tree::TreeI object
decorateRoot
Title : _decorateRoot
Usage : internal methods
Function:
Example :
Returns :
Args :
next_tree
Title : next_tree
Usage :
Function: Sorry not possible with this format
Returns : none
Args : none
perl v5.14.2 2012-03-02 Bio::TreeIO::svggraph(3pm)