11-20-2013
Hi,
Is the same because they have the same score
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I have a file with lines something like.
......
123_start
......
.......
123_end
....
.....
456_start
......
.....
456_end
....
.....
789_start
....
....
789_end (6 Replies)
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Hello, I am using awk to split a file into multiple files using command:
nawk '{
if ( $1 == "<process" )
{
n=split($2, arr, "\"");
file=arr
}
print > file }' processes.xml
<process name="Process1.process">
... (3 Replies)
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Arun kumar something somehting Enterting in to the line
.
.
.
.
Some text text Finshing the sentence
Some other text
.
.
.
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Again something somehting Enterting in to the line
.
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.
Again text text Finshing the sentence (6 Replies)
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Hi,
I've one requirement. I have to split one comma delimited file into multiple files based on one of the column values.
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Input file
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Good day all
I need some helps,
say that I have data like below, each field separated by a tab
DATE NAME ADDRESS
15/7/2012 LX a.b.c
15/7/2012 LX1 a.b.c
16/7/2012 AB a.b.c
16/7/2012 AB2 a.b.c
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Hi,
I have a Huge 7 GB file which has around 1 million records, i want to split this file into 4 files to contain around 250k messages each.
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Hi All,
I have the sales_data.csv file in the directory as below.
SDDCCR; SOM ; MD6546474777 ;05-JAN-16
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Hi,
I have two pipe separated files as below:
head -3 file1.txt
"HD"|"Nov 11 2016 4:08AM"|"0000000018"
"DT"|"240350264"|"56432"
"DT"|"240350264"|"56432"
head -3 file2.txt
"HD"|"Nov 15 2016 2:18AM"|"0000000019"
"DT"|"240350264"|"56432"
"DT"|"240350264"|"56432"
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I need to split the file contents with multiple rows based on patterns
Sample:
Input:
ABC101testXYZ102UKMNO1092testing
ABC999testKMNValid
Output:
ABC101test
XYZ102U
KMN1092testing
ABC999test
KMNValid
In this ABC , XYZ and KMN are patterns
Continue here./mod]
Please read forum... (1 Reply)
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I need to split the file contents with multiple rows based on patterns
Sample:
Input:
ABC101testXYZ102UKMNO1092testing
ABC999testKMNValid
Output:
ABC101test
XYZ102U
KMN1092testing
ABC999test
KMNValid
In this ABC , XYZ and KMN are patterns (6 Replies)
Discussion started by: Jairaj
6 Replies
LEARN ABOUT DEBIAN
fastx_quality_stats
FASTX_QUALITY_STATS(1) User Commands FASTX_QUALITY_STATS(1)
NAME
fastx_quality_stats - FASTX Statistics
DESCRIPTION
usage: fastx_quality_stats [-h] [-N] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit 0.0.13.2 by A. Gordon (gordon@cshl.edu)
[-h] = This helpful help screen. [-i INFILE] = FASTQ input file. default is STDIN. [-o OUTFILE] = TEXT output file. default is
STDOUT. [-N] = New output format (with more information per nucleotide/cycle).
The *OLD* output TEXT file will have the following fields (one row per column):
column = column number (1 to 36 for a 36-cycles read solexa file)
count = number of bases found in this column.
min = Lowest quality score value found in this column.
max = Highest quality score value found in this column.
sum = Sum of quality score values for this column.
mean = Mean quality score value for this column.
Q1 = 1st quartile quality score.
med = Median quality score.
Q3 = 3rd quartile quality score.
IQR = Inter-Quartile range (Q3-Q1).
lW = 'Left-Whisker' value (for boxplotting).
rW = 'Right-Whisker' value (for boxplotting).
A_Count = Count of 'A' nucleotides found in this column. C_Count = Count of 'C' nucleotides found in this column. G_Count = Count
of 'G' nucleotides found in this column. T_Count = Count of 'T' nucleotides found in this column. N_Count = Count of 'N' nucleo-
tides found in this column. max-count = max. number of bases (in all cycles)
The *NEW* output format:
cycle (previously called 'column') = cycle number max-count For each nucleotide in the cycle (ALL/A/C/G/T/N):
count = number of bases found in this column.
min = Lowest quality score value found in this column.
max = Highest quality score value found in this column.
sum = Sum of quality score values for this column.
mean = Mean quality score value for this column.
Q1 = 1st quartile quality score.
med = Median quality score.
Q3 = 3rd quartile quality score.
IQR = Inter-Quartile range (Q3-Q1).
lW = 'Left-Whisker' value (for boxplotting).
rW = 'Right-Whisker' value (for boxplotting).
SEE ALSO
The quality of this automatically generated manpage might be insufficient. It is suggested to visit
http://hannonlab.cshl.edu/fastx_toolkit/commandline.html
to get a better layout as well as an overview about connected FASTX tools.
fastx_quality_stats 0.0.13.2 May 2012 FASTX_QUALITY_STATS(1)