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Top Forums Shell Programming and Scripting Awk: adding fields after matching $1 Post 302870427 by kben on Sunday 3rd of November 2013 03:21:56 PM
Old 11-03-2013
Many thanks! It's perfect, going to study the magic of the working code.

Code:
TCONS_00017358;noncoding;0.968717;PAIP1 
TCONS_00024657;noncoding;0.995485;KCNC2 
TCONS_00005907;noncoding;0.808883;CDH11 
TCONS_00013445;noncoding;0.998353;TAF12 
TCONS_00001277;noncoding;0.934182;CHAD4
TCONS_00047071;noncoding;0.919281;MYO19 
TCONS_00040152;noncoding;0.988357;KCNC2

---------- Post updated at 03:21 PM ---------- Previous update was at 02:18 PM ----------

The duplicates seem to mess it upSmilie The script perfectly works on my example (now deemed to be incomplete), but if it get's to this:

file1 (ID + coding status + score)

Code:
TCONS_00000001;noncoding;0.833737
TCONS_00000002;coding;0.00522615
TCONS_00000004;coding;0.0284272
TCONS_00000006;noncoding;0.982945

file2 (ID + gen names)

Code:
TCONS_00000001;DDX11L1
TCONS_00000001;DDX11L1
TCONS_00000001;DDX11L1
TCONS_00000002;OR4F5
TCONS_00000004;LOC100133331
TCONS_00000004;LOC100133331
TCONS_00000004;LOC100133331
TCONS_00000004;LOC100133331
TCONS_00000003;LOC100132062
TCONS_00000003;LOC100132062
TCONS_00000003;LOC100132062
TCONS_00000005;OR4F3
TCONS_00000006;LOC643837
TCONS_00000006;LOC643837
TCONS_00000006;LOC643837
TCONS_00000010;LOC643837
TCONS_00000010;LOC643837
TCONS_00000010;LOC643837
TCONS_00000010;LOC643837
TCONS_00000010;LOC643837
TCONS_00000010;LOC643837
TCONS_00000010;LOC643837
TCONS_00000012;LOC643837
TCONS_00000012;LOC643837
TCONS_00000012;LOC643837
TCONS_00000012;LOC643837
TCONS_00000012;LOC643837
TCONS_00000012;LOC643837
TCONS_00000014;LOC643837
TCONS_00000014;LOC643837
TCONS_00000014;LOC643837
TCONS_00000014;LOC643837
TCONS_00000014;LOC643837
TCONS_00000016;LOC643837
TCONS_00000016;LOC643837
TCONS_00000016;LOC643837
TCONS_00000016;LOC643837
TCONS_00000017;LOC643837
TCONS_00000017;LOC643837
TCONS_00000017;LOC643837
TCONS_00000017;LOC643837
TCONS_00000015;LOC643837
TCONS_00000015;LOC643837
TCONS_00000015;LOC643837
TCONS_00000015;LOC643837
TCONS_00000015;LOC643837
TCONS_00000015;LOC643837
TCONS_00000013;LOC643837
TCONS_00000013;LOC643837
TCONS_00000013;LOC643837
TCONS_00000013;LOC643837
TCONS_00000013;LOC643837
TCONS_00000013;LOC643837
TCONS_00000013;LOC643837
TCONS_00000011;LOC643837
TCONS_00000011;LOC643837
TCONS_00000011;LOC643837
TCONS_00000011;LOC643837
TCONS_00000011;LOC643837
TCONS_00000011;LOC643837
TCONS_00000011;LOC643837
TCONS_00000011;LOC643837
TCONS_00000009;LOC643837
TCONS_00000009;LOC643837
TCONS_00000009;LOC643837
TCONS_00000009;LOC643837
TCONS_00000009;LOC643837
TCONS_00000009;LOC643837
TCONS_00000009;LOC643837
TCONS_00000009;LOC643837
TCONS_00000008;LOC643837
TCONS_00000008;LOC643837
TCONS_00000008;LOC643837
TCONS_00000008;LOC643837

the script output changes to:

Code:
TCONS_00000001;noncoding;0.833737   
TCONS_00000002;coding;0.00522615   
TCONS_00000004;coding;0.0284272   
TCONS_00000006;noncoding;0.982945


Last edited by Scrutinizer; 11-03-2013 at 03:40 PM..
 

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