Basically, all of the SNP-values are 0,1, 2 or NA, and they each have a score, listed in the second file. The total number of SNP-values are approx 70, so file one has 71 columns and approx 1000 rows, and file 2 has 2 columns and 71 rows.
I would like a script that for each row in file 1, takes the value of SNP1 and multiplies by the score of SNP1, creating a new colum for this sum, like this:
The NA is an indicator of missing data and can be changed into a numerical if needed, but it needs to be distinctly separated from 0, so maybe -9 would work.
I've tried creating a new file which looks like this:
Hi Guyz
I designed a script that can compare 2 columns(values) of single file and gives the closest numbers to the first column by comparing the numbers in first column with second and it works in a single file.
Now I'm trying to design a new script with 2 objectives for 2 files (not a single... (4 Replies)
I have 3 variables with different information.. they look like this (row-wise aswell):
Variable1 =
Roland
Kalle
Dalius
Variable2 =
ake123
ler321
kaf434
Variable3 =
Richardsen
Sworden
Lokthar
How can I sort them by variable3 alphabetical and add them into the same output so... (0 Replies)
I have the following code and want to use a loop to output the results to the fparams file.
if ($optparams == 1) then
# Set the tdarwin parameters
set txt01 = "Call to raytrac.csh"
set txt02 = ""
set txt03 = "./Scripts/raytrac.csh $*"
set txt04 = ""
set txt05 =... (0 Replies)
Hi all
I'm having a few issues with sorting some data into easily-readable columns.
Original data in file:
Number of visits IP Address
8 244.44.145.122
8 234.45.165.125
6 225.107.26.10
I firstly tried the column -t command which results in this:
Number of ... (4 Replies)
I have a list below, how can I have things separated nicely in columns
mv browseDir.tcsh browseDir.csh
mv checkSRDist.tcsh checkSRDist.csh
mv create-data-tinv.tcsh create-data-tinv.csh
mv createDocs.tcsh createDocs.csh
mv createMisfit.tcsh createMisfit.csh
mv createModel.tcsh... (4 Replies)
i have a file 'detail' which contains
cat detail
111111
222222
333333
444444
but detail may be 4 line file.6 line file or 8 line file like
cat detail
111111
222222
333333
444444
555555
666666
777777
888888
so i want a declare a loop which assign the value of first line in one... (11 Replies)
Hi, I am trying to multiply column#1 with column#2 using a shell script. How can I make a for-loop script using 1st column as "i" and the second column as "j" from the following file? Please feel free to share any alternative ways to multiplying column#1 with column#2.
.06 5.0000
.49 ... (6 Replies)
Hello Unix experts,
I need a help to create a subset file. I know with cut comand, its very easy to select many different columns, or threshold. But here I have a bit problem as in my data file is big. And I don't want to identify the column numbers or names manually. I am trying to find any... (7 Replies)
Hi,
I have list of files present in a folder. I want to search for a particular keyword sequentially and create a file which will be later used by some other program.
Input files:
$ ls
a.dsx b.dsx c.dsx Dataline_.txt Dataline.txt loop.sh
$ cat *.dsx
help
tyiis
global
for i in... (4 Replies)
Discussion started by: mac4rfree
4 Replies
LEARN ABOUT CENTOS
locale::codes::langext
Locale::Codes::LangExt(3) User Contributed Perl Documentation Locale::Codes::LangExt(3)NAME
Locale::Codes::LangExt - standard codes for language extension identification
SYNOPSIS
use Locale::Codes::LangExt;
$lext = code2langext('acm'); # $lext gets 'Mesopotamian Arabic'
$code = langext2code('Mesopotamian Arabic'); # $code gets 'acm'
@codes = all_langext_codes();
@names = all_langext_names();
DESCRIPTION
The "Locale::Codes::LangExt" module provides access to standard codes used for identifying language extensions, such as those as defined in
the IANA language registry.
Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default IANA language
registry codes will be used.
SUPPORTED CODE SETS
There are several different code sets you can use for identifying language extensions. A code set may be specified using either a name, or
a constant that is automatically exported by this module.
For example, the two are equivalent:
$lext = code2langext('acm','alpha');
$lext = code2langext('acm',LOCALE_LANGEXT_ALPHA);
The codesets currently supported are:
alpha
This is the set of three-letter (lowercase) codes from the IANA language registry, such as 'acm' for Mesopotamian Arabic.
This is the default code set.
ROUTINES
code2langext ( CODE [,CODESET] )
langext2code ( NAME [,CODESET] )
langext_code2code ( CODE ,CODESET ,CODESET2 )
all_langext_codes ( [CODESET] )
all_langext_names ( [CODESET] )
Locale::Codes::LangExt::rename_langext ( CODE ,NEW_NAME [,CODESET] )
Locale::Codes::LangExt::add_langext ( CODE ,NAME [,CODESET] )
Locale::Codes::LangExt::delete_langext ( CODE [,CODESET] )
Locale::Codes::LangExt::add_langext_alias ( NAME ,NEW_NAME )
Locale::Codes::LangExt::delete_langext_alias ( NAME )
Locale::Codes::LangExt::rename_langext_code ( CODE ,NEW_CODE [,CODESET] )
Locale::Codes::LangExt::add_langext_code_alias ( CODE ,NEW_CODE [,CODESET] )
Locale::Codes::LangExt::delete_langext_code_alias ( CODE [,CODESET] )
These routines are all documented in the Locale::Codes::API man page.
SEE ALSO
Locale::Codes
The Locale-Codes distribution.
Locale::Codes::API
The list of functions supported by this module.
http://www.iana.org/assignments/language-subtag-registry
The IANA language subtag registry.
AUTHOR
See Locale::Codes for full author history.
Currently maintained by Sullivan Beck (sbeck@cpan.org).
COPYRIGHT
Copyright (c) 2011-2013 Sullivan Beck
This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
perl v5.16.3 2013-02-27 Locale::Codes::LangExt(3)
10-04-2013
