09-11-2013
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi,
snp.txt
CHR_A SNP_A BP_A_st BP_A_End CHR_B BP_B SNP_B R2 p-SNP_A p-SNP_B
5 rs1988728 74904317 74904318 5 74960646 rs1427924 0.377333 0.000740085 0.013930081
5 ... (12 Replies)
Discussion started by: genehunter
12 Replies
2. Shell Programming and Scripting
I have a datafile that is formatted as fixed.
I know that each line should contain 880 characters.
I want to separate the file into 2 files, one that has lines with 880 characters and the other file with everything else.
Is this possible ? (9 Replies)
Discussion started by: cheeko111
9 Replies
3. UNIX for Advanced & Expert Users
Hi All,
I have a very huge file (4GB) which has duplicate lines. I want to delete duplicate lines leaving unique lines. Sort, uniq, awk '!x++' are not working as its running out of buffer space.
I dont know if this works : I want to read each line of the File in a For Loop, and want to... (16 Replies)
Discussion started by: krishnix
16 Replies
4. Shell Programming and Scripting
hi
my problem is little complicated one. i have 2 files which appear like this
file 1
abbsss:aa:22:34:as akl abc 1234
mkilll:as:ss:23:qs asc abc 0987
mlopii:cd:wq:24:as asd abc 7866
file2
lkoaa:as:24:32:sa alk abc 3245
lkmo:as:34:43:qs qsa abc 0987
kloia:ds:45:56:sa acq abc 7805
i... (5 Replies)
Discussion started by: anurupa777
5 Replies
5. Shell Programming and Scripting
Hello,
I need some sort of way to extract every date contained in a file, and count how many of those dates there are.
Here are the specifics:
The date format I'm looking for is mm/dd/yyyy
I only need to look after line 45 in the file (that's where the data begins)
The columns of... (2 Replies)
Discussion started by: ronan1219
2 Replies
6. UNIX for Dummies Questions & Answers
Hello guys. I really hope someone will help me with this one..
So, I have to write this script who:
- creates a file home/student/vmdisk of 10 mb
- formats that file to ext3
- mounts that partition to /mnt/partition
- creates a file /mnt/partition/data. In this file, there will... (1 Reply)
Discussion started by: razolo13
1 Replies
7. Shell Programming and Scripting
Hello to all, happy new year 2013!
May somebody could help me, is about a very similar problem to the problem I've posted here where the member rdrtx1 and bipinajith helped me a lot.
https://www.unix.com/shell-programming-scripting/211147-map-values-blocks-single-line-2.html
It is very... (3 Replies)
Discussion started by: Ophiuchus
3 Replies
8. Shell Programming and Scripting
file1:
file2:
I need to find matches for any lines in file1 that appear in file2. Desired output is '>' plus the file1 term, followed by the line after the match in file2 (so the title is a little misleading):
This is honestly beyond what I can do without spending the whole night on it, so I'm... (2 Replies)
Discussion started by: pathunkathunk
2 Replies
9. UNIX for Dummies Questions & Answers
I would like to print unique lines without sort or unique. Unfortunately the server I am working on does not have sort or unique. I have not been able to contact the administrator of the server to ask him to add it for several weeks. (7 Replies)
Discussion started by: cokedude
7 Replies
10. UNIX for Beginners Questions & Answers
For some reason I am having difficulty performing what should be a fairly easy task. I would like to print lines of a file that have a unique value in the first field. For example, I have a large data-set with the following excerpt:
PS003,001 MZMWR/ L-DWD// *
PS003,001... (4 Replies)
Discussion started by: jvoot
4 Replies
LEARN ABOUT CENTOS
gvmap.sh
GVMAP.SH(1) General Commands Manual GVMAP.SH(1)
NAME
gvmap.sh - pipeline for running gvmap
SYNOPSIS
gvmap.sh [-vV?] [ options ] [ -o outfile ] [ files ]
DESCRIPTION
gvmap.sh takes as input a graph in DOT format, performs a layout, runs the output through gvmap and renders the output. At some point, it
is hoped to integrate all of these tasks into gvmap.
OPTIONS
The following options are supported:
-a k The integer k specifies the average number of artificial points added along the bounding box of the labels. Such artificial points
are added to avoid a country boundary cutting through the boundary box of the labels. Computing time is proportional to k; hence,
for large graphs, a small value of k is suggested. If k = -1, a suitable value of k is automatically selected based on the graph
size. By default k = -1.
-K layout
specifies which program should be use for the initial layout. By default, sfdp is run. Also by default, the layout is passed the
flag -Goverlap=prism. This can be overridden using a -g flag.
-T format
specifies the final output format. This works the same way as the -T flag for any Graphviz layout program.
-N attr=val
specifies the setting of a default node attribute during the rendering phase. This works the same way as the -N flag for any
Graphviz layout program.
-G attr=val
specifies the setting of a graph attribute during the rendering phase. This works the same way as the -G flag for any Graphviz lay-
out program.
-E attr=val
specifies the setting of a default edge attribute during the rendering phase. This works the same way as the -E flag for any
Graphviz layout program.
-n attr=val
specifies the setting of a default node attribute during the layout phase. This works the same way as the -N flag for any Graphviz
layout program.
-g attr=val
specifies the setting of a graph attribute during the layout phase. This works the same way as the -G flag for any Graphviz layout
program.
-e attr=val
specifies the setting of a default edge attribute during the layout phase. This works the same way as the -E flag for any Graphviz
layout program.
-A flag
specifies a flag to be passed to gvmap. For example, gvmap.sh -Ae -As3 causes gvmap -e -s3 to be run.
-v Set verbose mode.
-V Print version information and exit.
-? Print usage information and exit.
EXAMPLES
The following invocation creates a map with edges in semi-transparent light gray and nodes laid out using sfdp:
gvmap.sh -Ae -Ecolor=#55555522 -Tpng foo.gv > foo.png
It is equivalent to running the pipeline
sfdp -Goverlap=prism foo.gv | gvmap -e | neato -n2 -Ecolor=#55555522 -Tpng > foo.png
AUTHOR
Emden R. Gansner <erg@research.att.com>
SEE ALSO
gvmap(1), sfdp(1), neato(1), gvpr(1)
E. R. Gansner, Y. Hu, S. G. Kobourov, "GMap: Visualizing graphs and clusters as maps," Proc. Pacific Vis. 2010, pp. 201-208.
31 March 2011 GVMAP.SH(1)