I had a small question.I had a file from which i need to extract data.
I have written the below script to check if the file exists and if it exists extract requierd columns from the file.
From above out of 13 columns i am extracting 5 column and their values.
Now how i can accomodate a condition in above script so that it check if $13(13 column) is null it should throw an error and send out an email like error in file format.
Hi All,
I have a table with 10 columns. Some columns(2nd,4th,5th,7th,8th and 10th) are Not Null columns. I'll get a tab-delimited file and want to check col by col and generate seperate error code for each col eg:102 if 2nd col value is NULL and 104 if 4th col value is NULL so on... I am a... (7 Replies)
Hi All,
I have a file with 10 columns and get the required data for nine columns properly except 8th. In 8th column i have both NULL and NON NULL values...i.e
certain records have values for all the columns including 8th column and certain records have 8th column as NULL.My requisite is,without... (20 Replies)
Hi All,
I have a file which is having 3 columns as (string string integer)
a b 1
x y 2
p k 5
y y 4
.....
.....
Question:
I want get the unique value of column 2 in a sorted way(on column 2) and the sum of the 3rd column of the corresponding rows. e.g the above file should return the... (6 Replies)
Hi Gurus,
I have a tab separated text file with two columns. I would like to make the first column values as headings for the second column values.
Ex.
>value1 subjects
>value2 priorities
>value3 requirements
...etc
and I want to have a file
>value1
subjects
>value2
priorities... (4 Replies)
Hello experts,
I have a requirement where I have to implement two checks on a csv file:
1. Check to see if the value in first column is duplicate, if any value is duplicate script should exit.
2. Check to verify if the value at second column is between "yes" or "no", if it is anything else... (4 Replies)
Hi Guys,
I am new to shell script.I need your help to write a shell script.
I have a csv file which has 13 columns separated by ,
I have written below script to fetch required 5 columns.
awk -F, '(NR==1){h3=$3;h4=$4;h8=$8;h9=$9;h13=$13;next}(NF>1) \
{print... (5 Replies)
Gents,
I have a file where i would like to check the constant increment by 2 in column 2.
5450 1000
5450 1002
5450 1004
5450 1006
5465 1000
5465 1002
5465 1006
5465 1008
5550 1002
5550 1004
5550 1006
5550 1008
6830 1000
6830 1002
6830 1008
6830 1010 (6 Replies)
Hi,
I have a requirement where I have to check whether the mandatory columns in a pipe delimited file is null and print error message.
For eg, I have to check if the 3rd,5th,6th,7th and 8th column are null and print the message "<column name> is null".
The data file will have aroung 100,000... (6 Replies)
Hi Folks,
I'm trying to write a simple file sanity check script. I have a directory with dozen CSV files containing id,edname,firstname,lastname,suffix,email.
I like to write a awk script to check if first field contain a number and is not empty. and fields number 3,4 & 6 are not empty and... (3 Replies)
Discussion started by: dc34684
3 Replies
LEARN ABOUT OPENDARWIN
funtbl
funtbl(1) SAORD Documentation funtbl(1)NAME
funtbl - extract a table from Funtools ASCII output
SYNOPSIS
funtable [-c cols] [-h] [-n table] [-p prog] [-s sep] <iname>
DESCRIPTION
[NB: This program has been deprecated in favor of the ASCII text processing support in funtools. You can now perform fundisp on funtools
ASCII output files (specifying the table using bracket notation) to extract tables and columns.]
The funtbl script extracts a specified table (without the header and comments) from a funtools ASCII output file and writes the result to
the standard output. The first non-switch argument is the ASCII input file name (i.e. the saved output from funcnts, fundisp, funhist,
etc.). If no filename is specified, stdin is read. The -n switch specifies which table (starting from 1) to extract. The default is to
extract the first table. The -c switch is a space-delimited list of column numbers to output, e.g. -c "1 3 5" will extract the first
three odd-numbered columns. The default is to extract all columns. The -s switch specifies the separator string to put between columns.
The default is a single space. The -h switch specifies that column names should be added in a header line before the data is output. With-
out the switch, no header is prepended. The -p program switch allows you to specify an awk-like program to run instead of the default
(which is host-specific and is determined at build time). The -T switch will output the data in rdb format (i.e., with a 2-row header of
column names and dashes, and with data columns separated by tabs). The -help switch will print out a message describing program usage.
For example, consider the output from the following funcnts command:
[sh] funcnts -sr snr.ev "ann 512 512 0 9 n=3"
# source
# data file: /proj/rd/data/snr.ev
# arcsec/pixel: 8
# background
# constant value: 0.000000
# column units
# area: arcsec**2
# surf_bri: cnts/arcsec**2
# surf_err: cnts/arcsec**2
# summed background-subtracted results
upto net_counts error background berror area surf_bri surf_err
---- ------------ --------- ------------ --------- --------- --------- ---------
1 147.000 12.124 0.000 0.000 1600.00 0.092 0.008
2 625.000 25.000 0.000 0.000 6976.00 0.090 0.004
3 1442.000 37.974 0.000 0.000 15936.00 0.090 0.002
# background-subtracted results
reg net_counts error background berror area surf_bri surf_err
---- ------------ --------- ------------ --------- --------- --------- ---------
1 147.000 12.124 0.000 0.000 1600.00 0.092 0.008
2 478.000 21.863 0.000 0.000 5376.00 0.089 0.004
3 817.000 28.583 0.000 0.000 8960.00 0.091 0.003
# the following source and background components were used:
source_region(s)
----------------
ann 512 512 0 9 n=3
reg counts pixels sumcnts sumpix
---- ------------ --------- ------------ ---------
1 147.000 25 147.000 25
2 478.000 84 625.000 109
3 817.000 140 1442.000 249
There are four tables in this output. To extract the last one, you can execute:
[sh] funcnts -s snr.ev "ann 512 512 0 9 n=3" | funtbl -n 4
1 147.000 25 147.000 25
2 478.000 84 625.000 109
3 817.000 140 1442.000 249
Note that the output has been re-formatted so that only a single space separates each column, with no extraneous header or comment informa-
tion.
To extract only columns 1,2, and 4 from the last example (but with a header prepended and tabs between columns), you can execute:
[sh] funcnts -s snr.ev "ann 512 512 0 9 n=3" | funtbl -c "1 2 4" -h -n 4 -s " "
#reg counts sumcnts
1 147.000 147.000
2 478.000 625.000
3 817.000 1442.000
Of course, if the output has previously been saved in a file named foo.out, the same result can be obtained by executing:
[sh] funtbl -c "1 2 4" -h -n 4 -s " " foo.out
#reg counts sumcnts
1 147.000 147.000
2 478.000 625.000
3 817.000 1442.000
SEE ALSO
See funtools(7) for a list of Funtools help pages
version 1.4.2 January 2, 2008 funtbl(1)