I'm showing in the attached image:
- Where the f's appear (in pat1 and pat2).
- Where pattern that begins with 0x84 appears (at the end of sub-block) and
is composed by 0x84 0x0e + 14 bytes.
Hi all,
Does anybody know or guide me on how to remove the first N bytes and the last N bytes from a binary file? Is there any AWK or SED or any command that I can use to achieve this?
Your help is greatly appreciated!!
Best Regards,
Naveen. (1 Reply)
Hello,
I have come across the necessity for me to deal with binary sequences and I had a few questions.
1- Does any UNIX scripting language provide any tool or command for converting text data to binary sequences? Example of binary sequence: "0x97 0x93 0x85 0x40 0xd5 0xd6 0xd7"
2- If I want... (2 Replies)
Hi,
I have an one-line file consisting of a sequence of 660 letters. I would like to extract 9-letter blocks iteratively:
ASDFGHJKLQWERTYUIOPZXCVBNM
first block: ASDFGHJKL
1nd block: SDFGHJKLQ
What I have so far only gives me the first block, can anyone please explain why?
cat... (7 Replies)
Hi,
This is part of a large text file I need to separate out.
I'd like some help to build a shell script that will extract the text between sets of dashed lines, write that to a new file using the whole or part of the first text string as the new file name, then move on to the next one and... (7 Replies)
The title is clear: why does ext3 allocate 8 blocks for files that are few bytes long?
If I create a file named "test", put a few chars in it, and then I run:
stat test
I get that "Blocks: 8"
I searched in the web and found that ext does that, it allocates 8 blocks even if It doesn't need... (4 Replies)
Hello guys. I really hope someone will help me with this one..
So, I have to write this script who:
- creates a file home/student/vmdisk of 10 mb
- formats that file to ext3
- mounts that partition to /mnt/partition
- creates a file /mnt/partition/data. In this file, there will... (1 Reply)
Hi,
I have a file with more than 28000 records and it looks like below..
>mm10_refflat_ABCD range=chr1:1234567-2345678
tgtgcacactacacatgactagtacatgactagac....so on
>mm10_refflat_BCD range=chr1:3234567-4545678...
tgtgcacactacacatgactagtatgtgcacactacacatgactagta
.
.
.
.
.
so on
... (2 Replies)
I have a fastq file from small RNA sequencing with sequence lengths between 15 - 30. I wanted to filter sequence lengths between 21-25 and write to another fastq file. how can i do that? (4 Replies)
I have a text file, input.fasta contains some protein sequences. input.fasta is shown below.
>P02649
MKVLWAALLVTFLAGCQAKVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQT
LSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQA
RLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVY... (8 Replies)
I sat down yesterday to write this script and have just realised that my methodology is broken........
In essense I have.....
----------------------------------------------------------------- (This line really is in the file)
Service ID: 12345 ... (7 Replies)
Discussion started by: Bashingaway
7 Replies
LEARN ABOUT DEBIAN
io_waitread
io_waitread(3) Library Functions Manual io_waitread(3)NAME
io_waitread - read from a descriptor
SYNTAX
#include <io.h>
int io_waitread(int64 fd,char* buf,int64 len);
DESCRIPTION
io_waitread tries to read len bytes of data from descriptor fd into buf[0], buf[1], ..., buf[len-1]. (The effects are undefined if len is 0
or smaller.) There are several possible results:
o o_waitread returns an integer between 1 and len: This number of bytes was available for immediate reading; the bytes were read into the
beginning of buf. Note that this number can be, and often is, smaller than len; you must not assume that io_waitread always succeeds in
reading exactly len bytes.
o io_waitread returns 0: No bytes were read, because the descriptor is at end of file. For example, this descriptor has reached the end of
a disk file, or is reading an empty pipe that has been closed by all writers.
o io_waitread returns -3, setting errno to something other than EAGAIN: No bytes were read, because the read attempt encountered a persis-
tent error, such as a serious disk failure (EIO), an unreachable network (ENETUNREACH), or an invalid descriptor number (EBADF).
SEE ALSO io_nonblock(3), io_waitread(3), io_waitreadtimeout(3)io_waitread(3)