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Top Forums Shell Programming and Scripting [Solved] Converting the data into matrix with 0's and 1's Post 302844913 by raj_k on Tuesday 20th of August 2013 09:35:25 AM
Old 08-20-2013
[Solved] Converting the data into matrix with 0's and 1's

I have a file that contains 2 columns tag,pos
cat input_file

Code:
tag	pos
atg	10
ata	16
agt	15
agg	19
atg	17
agg	14

I have used following command to sort the file based on second column
Code:
sort -k 2 input_file
tag	pos 
atg	10
agg	14
agt	15
ata	16	
agg	19
atg	17

i want to convert it into a matrix as below with 5 as an interval and #1 and #0 representing the presence or absence of that tag within that interval

output_file

Code:
	atg	agg	agt	ata
10-15	1	1	1	0
15-20	1	1	0	1

The first row in the output matrix is 10-15 because in the sorted file it starts from 10
 

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PAPS(1) 						      General Commands Manual							   PAPS(1)

NAME
paps - UTF-8 to PostScript converter using Pango SYNOPSIS
paps [options] files... DESCRIPTION
paps reads a UTF-8 encoded file and generates a PostScript language rendering of the file. The rendering is done by creating outline curves through the pango ft2 backend. OPTIONS
These programs follow the usual GNU command line syntax, with long options starting with two dashes (`-'). A summary of options is included below. --landscape Landscape output. Default is portrait. --columns=cl Number of columns output. Default is 1. --font=desc Set the font description. Default is Monospace 12. --rtl Do rtl layout. --paper ps Choose paper size. Known paper sizes are legal, letter, a4. Default is A4. --bottom-margin=bm Set bottom margin in postscript points (1/72 inch). Default is 36. --top-margin=tm Set top margin. Default is 36. --left-margin=lm Set left margin. Default is 36. --right-margin=rm Set right margin. Default is 36. --help Show summary of options. --header Draw page header for each page. --markup Interpret the text as pango markup. --encoding=ENCODING Assume the documentation encoding is ENCODING. --lpi Set the lines per inch. This determines the line spacing. --cpi Set the characters per inch. This is an alternative method of specifying the font size. --stretch-chars Indicates that characters should be stretched in the y-direction to fill up their vertical space. This is similar to the texttops behaviour. AUTHOR
paps was written by Dov Grobgeld <dov.grobgeld@gmail.com>. This manual page was written by Lior Kaplan <kaplan@debian.org>, for the Debian project (but may be used by others). April 17, 2006 PAPS(1)
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