Filter file by length, looking only at lines that don't begin with ">"
I have a file that stores data in pairs of lines, following this format:
line 1: header (preceded by ">")
line 2: sequence
Example.txt:
I want to filter out the sequences and corresponding headers for all sequences that are less than 11 characters. Desired output:
I can search each line for lines less than 11 characters, and print that line along with the header. The problem I'm having is ignoring the headers (i.e. lines beginning with ">") when I do the length search.
For example
Gives me
How do I tell awk not to ignore lines beginning with ">"?
Last edited by Scrutinizer; 07-23-2013 at 02:55 AM..
Reason: code tags also for data samples. Do not use quote tags
Hi Guys,
I want ur replies very very Urgently.Plz. don't ignore this mail.
I am using Sco openserver 5.0.2 and i have downloaded jdk1.2.2
for that i have installed it.The jdk is working fine.
Then i download jakarta-tomcat-4.1.24.zip and i have installed it.
In order... (1 Reply)
Hi,
I have a file:
file.txt
1 word
2 word
word
word
3 word
4 word
and I would like to create a set:
set number = `cut -d" " -f1 ${1}` #${1} is the text file
but it should only contain the lines which begin with numbers,
and another set which contains the lines which begin with... (10 Replies)
Hi Everyone,
# cat a.txt
a;b;c;64O
a;b;c;d;ee;f
# cat a.pl
#!/usr/bin/perl
use strict;
use warnings;
my $tmp3 = ",,a,,b,,c,,d,,e,,f,,";
open(my $FA, "a.txt") or die "$!";
while(<$FA>) {
chomp;
my @tmp=split(/\;/, $_);
if ( ($tmp =~ m/^(64O)/i) || ($tmp... (3 Replies)
Hi,
I have line in input file as below:
3G_CENTRAL;INDONESIA_(M)_TELKOMSEL;SPECIAL_WORLD_GRP_7_FA_2_TELKOMSEL
My expected output for line in the file must be :
"1-Radon1-cMOC_deg"|"LDIndex"|"3G_CENTRAL|INDONESIA_(M)_TELKOMSEL"|LAST|"SPECIAL_WORLD_GRP_7_FA_2_TELKOMSEL"
Can someone... (7 Replies)
I have a bunch of random character lines like ABCEDFG. I want to find all lines with "A" and then change any "E" to "X" in the same line. ALL lines with "A" will have an "X" somewhere in it. I have tried sed awk and vi editor. I get close, not quite there. I know someone has already solved this... (10 Replies)
How to use "mailx" command to do e-mail reading the input file containing email address, where column 1 has name and column 2 containing “To” e-mail address
and column 3 contains “cc” e-mail address to include with same email.
Sample input file, email.txt
Below is an sample code where... (2 Replies)
Hi All
It's me again with another huge txt files. :confused:
What I have:
- I have 33 huge txt files in a folder.
- I have thousands of line in this txt file which contain many the letter "x" in them.
- Some of them have more than one "x" character in the line.
What I want to achieve:... (8 Replies)
Hi
Can someone tell me which script will work best (in terms of speed and simplicity to write and run) for a large text file to filter all the lines with a minimum specified length of words ? A sample script with be definitely of great help !!! Thanks in advance. :) (4 Replies)
Hello.
System : opensuse leap 42.3
I have a bash script that build a text file.
I would like the last command doing :
print_cmd -o page-left=43 -o page-right=22 -o page-top=28 -o page-bottom=43 -o font=LatinModernMono12:regular:9 some_file.txt
where :
print_cmd ::= some printing... (1 Reply)
Discussion started by: jcdole
1 Replies
LEARN ABOUT OSF1
wscrl
curs_scroll(3) Library Functions Manual curs_scroll(3)NAME
curs_scroll, scroll, scrl, wscrl - Scroll a Curses window
SYNOPSIS
#include <curses.h>
int scroll(
WINDOW *win ); int scrl(
int n ); int wscrl(
WINDOW *win,
int n );
LIBRARY
Curses Library (libcurses)
STANDARDS
Interfaces documented on this reference page conform to industry standards as follows:
scrl, wscrl, scroll: XCURSES4.2
Refer to the standards(5) reference page for more information about industry standards and associated tags.
DESCRIPTION
The scroll routine scrolls the window up one line. This involves moving the lines in the window data structure. As an optimization, if the
scrolling region of the window is the entire screen, the physical screen is scrolled at the same time.
The scrl and wscrl routines, for positive n, scroll the current or specified window up n lines (line i+n becomes line i); otherwise, these
routines scroll the window down n lines. This operation involves moving the lines in the window character-image structure. The routines do
not change the current cursor position.
For the scroll, scrl, and wscrl functions to work, the scrollok option must be enabled.
NOTES
The header file <curses.h> automatically includes the header file <stdio.h>.
Note that scrl may be a macro.
RETURN VALUES
All routines return the integer ERR upon failure and OK upon successful completion.
SEE ALSO
Functions: curses(3), curs_outopts(3)
Others: standards(5)curs_scroll(3)