Sponsored Content
Top Forums Shell Programming and Scripting Match files based on either of the two columns awk Post 302827263 by smitra on Friday 28th of June 2013 10:50:52 AM
Old 06-28-2013
Dear zaxxon,
Thank you very much. But it still producec the similar output which I already got.
But I have the file bit more complicated. I am editing your example. Thanks for creating the example.
Code:
$ cat file1
1000094 2
10039307 1
10039641 1
10954458 11
10047359 1
10954459 2
10120302 1
10954460 13
10121776 1
10121865 32
$ cat file2
protein_gi GeneID Symbol
10954455 1246500 repA1
10954457 1246501 repA2
10954458 1246502 leuA
10954459 1246503 leuB
10954460 1246504 leuC
10954461 1246505 leuD
31982990 10121776 ibp
31982991 1246510 repA1
10954456 1000094 pLeuDn_02

Now I want this output
Code:
10954458 1246502 leuA 11
10954459 1246503 leuB 2
10954460 1246504 leuC 13
31982990 10121776 ibp 1
10954456 1000094 pLeuDn_02 2


Your advice will be really helpful..
Thanks in advance,
Best wishes,
Mitra

Last edited by smitra; 06-28-2013 at 11:56 AM..
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

awk 3 files to one based on multiple columns

Hi all, I have three files, one is a navigation file, one is a depth file and one is a file containing the measured field of gravity. The formats of the files are; navigation file: 2006 320 17 39 0 0 *nav 21.31542 -157.887 2006 320 17 39 10 0 *nav 21.31542 -157.887 2006 320 17 39 20 0... (2 Replies)
Discussion started by: andrealphus
2 Replies

2. Shell Programming and Scripting

match columns using awk

Hi All, I need some help in writing a small script using Awk. My input file has following deatils A,B,C,D 8239359,8239359,8388125,8388125 8239359,8239359,8388125,8388125 7165981,7165981,8363138,8363138 8283830,8283830,8382987,8382987 8209964,8209964,8367098,8367098 ... (8 Replies)
Discussion started by: pistachio
8 Replies

3. Shell Programming and Scripting

match two key columns in two files and print output (awk)

I have two files... file1 and file2. Where columns 1 and 2 of file1 match columns 1 and 2 of file2 I want to create a new file that is all file1 + columns 3 and 4 of file2 :b: Many thanks if you know how to do this.... :b: file1 31-101 106 0 92 31-101 106 29 ... (2 Replies)
Discussion started by: pelhabuan
2 Replies

4. Shell Programming and Scripting

awk script to split file into multiple files based on many columns

So I have a space delimited file that I'd like to split into multiple files based on multiple column values. This is what my data looks like 1bc9A02 1 10 1000 FTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNNGVFQSTDTCYVLSFAIIMLNTSLHNPNVKDKPTVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPELEHHHHHH 1ku1A02 1 10... (9 Replies)
Discussion started by: viored
9 Replies

5. UNIX for Advanced & Expert Users

Match and print based on columns

HI, I have 2 different questions in this thread. Consider 2 files as input (input file have different line count ) File 1 1 1 625 56 1 12 657 34 1 9 25 45 1 2 20 54 67 3 25 35 27 4 45 73 36 5 125 56 45 File2 1 1 878 76 1 9 83 67 2 20 73 78 4 47 22 17 3 25 67 99 (4 Replies)
Discussion started by: rossi
4 Replies

6. Shell Programming and Scripting

New files based off match or no match

Trying to match $2 in original_targets with $2 of new_targets . If the two numbers match exactly then a match.txt file is outputted using the information in the new_targets in the beginning 4 fields $1, $2, $3, $4 and value of $4 in the original_targets . If there is "No Match" then a no... (2 Replies)
Discussion started by: cmccabe
2 Replies

7. Shell Programming and Scripting

awk to update file based on partial match in field1 and exact match in field2

I am trying to create a cronjob that will run on startup that will look at a list.txt file to see if there is a later version of a database using database.txt as the source. The matching lines are written to output. $1 in database.txt will be in list.txt as a partial match. $2 of database.txt... (2 Replies)
Discussion started by: cmccabe
2 Replies

8. Shell Programming and Scripting

Comparing two columns in two files and printing a third based on a match

Hello all, First post here. I did not notice a previous post to help me down the right path. I am looking to compare a column in a CSV file against another file (which is not a column match one for one) but more or less when a match is made, I would like to append a third column that contains a... (17 Replies)
Discussion started by: dis0wned
17 Replies

9. Shell Programming and Scripting

awk to create subdirectory based on match between two files

In the below awk I am trying to mkdir based of an exact match between file2 line starting with R_2019.... and file1 line starting with R_2019. When a match is found there is a folder located at /home/cmccabe/run with the same name as the match where each $2 in file1 is a new subdirectory in that... (2 Replies)
Discussion started by: cmccabe
2 Replies

10. UNIX for Beginners Questions & Answers

Data match 2 files based on first 2 columns matching only and join if match

Hi, i have 2 files , the data i need to match is in masterfile and i need to pull out column 3 from master if column 1 and 2 match and output entire row to new file I have tried with join and awk and i keep getting blank outputs or same file is there an easier way than what i am... (4 Replies)
Discussion started by: axis88
4 Replies
GRUB-RENDER-LABEL(1)                                               User Commands                                              GRUB-RENDER-LABEL(1)

NAME
grub-render-label - generate a .disk_label for Apple Macs. SYNOPSIS
grub-render-label [OPTION...] [OPTIONS] DESCRIPTION
Render Apple .disk_label. -b, --bgcolor=COLOR use COLOR for background -c, --color=COLOR use COLOR for text -f, --font=FILE use FILE as font (PF2). -i, --input=FILE read text from FILE. -o, --output=FILE set output filename. Default is STDOUT -t, --text=STRING set the label to render -v, --verbose print verbose messages. -?, --help give this help list --usage give a short usage message -V, --version print program version Mandatory or optional arguments to long options are also mandatory or optional for any corresponding short options. REPORTING BUGS
Report bugs to <bug-grub@gnu.org>. SEE ALSO
The full documentation for grub-render-label is maintained as a Texinfo manual. If the info and grub-render-label programs are properly installed at your site, the command info grub-render-label should give you access to the complete manual. grub-render-label (GRUB) 2.02-2ubuntu8.3 July 2018 GRUB-RENDER-LABEL(1)
All times are GMT -4. The time now is 04:41 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy