Thanks Man!! It worked like a rocket..perfect..!!
Made few changes to script i.e. added sort -t ';' -k6 {to sort the common identifier in order means alarm then corresponding clearAlarm else alarm and corresponding ClearAlarm are most of the times far in file, not next line}
How this script would react if a alarm is not clear i.e it does not have a clearAlarm event? What has to be modified in it..
hi,
i am getting this error while executing the script with cron:-
COMMON_ROOT=/files/common: is not an identifier
Manual run is ok, not getting any error. (2 Replies)
I use sed and awk. I am not a big expert but to some extent. I have file like this
PFA0165c ctg_6843
PFA0335w ctg_6843 ctg_6871 ctg_6977 ctg_6654 ctg_7052 ctg_6899 ctg_6840 ctg_7202 ctg_6638
PFA0155c ctg_6877 ctg_7169 ctg_7179 ctg_6843 ctg_6871
Now I want output like... (6 Replies)
Hello guys,
I need a script to get the common lines from two files with a criteria that if the first two columns match then I keep the maximum value of the 3rd column.(tab separated columns)
Sample input:
file1:
111 222 0.1
333 444 0.5
555 666 0.4
file 2:
111 222 0.7
555 666... (5 Replies)
Hi all,
This should be very easy but I can't figure it out...
I have a file that looks like this:
@SRR057408.1 FW8Y5CK02R652T length=34
AGCAGTGGTATCAACGCAGAGTAAGCAGTGGTAT
+SRR057408.1 FW8Y5CK02R652T length=34
FIIHFF6666?=:88@@@BBD:::?@ABBAAA>8
@SRR057408.2 FW8Y5CK02TBMHV length=52... (1 Reply)
Hello guys,
I need a script to get the common lines from two files with a criteria that if the first two columns match then I keep the maximum value of the 5th column.(tab separated columns) . 3rd and 4th columns corresponds to the row which has highest value for the 5th column.
Sample... (2 Replies)
Hi
I have 2 files with following data
First file,
sp|Q676U5|A16L1_HUMAN,
Autophagy-related protein 16-1 OS=Homo sapiens GN=ATG16L1 PE=1 SV=2,
Maximum coiled-coil residue probability: 0.657 in position 163.
Maximum dimeric residue probability: 0.288 in position 163.
... (1 Reply)
Hi,
I have a table to be imported for R as matrix or data.frame but I first need to edit it because I've got several lines with the same identifier (1st column), so I want to sum the each column (2nd -nth) of each identifier (1st column)
The input is for example, after sorted:
K00001 1 1 4 3... (8 Replies)
Hi All,
i have below two files.
FILE:
NAME="/dev/sda" TYPE="disk" SIZE="60G" OWNER="root" GROUP="disk" MODE="brw-rw----" PKNAME="" MOUNTPOINT=""
NAME="/dev/sda1" TYPE="part" SIZE="500M" OWNER="root" GROUP="disk" MODE="brw-rw----" PKNAME="/dev/sda" MOUNTPOINT="/boot"
NAME="/dev/sda2"... (3 Replies)
Discussion started by: balu1234
3 Replies
LEARN ABOUT OSX
alarm
ALARM(3) BSD Library Functions Manual ALARM(3)NAME
alarm -- set signal timer alarm
LIBRARY
Standard C Library (libc, -lc)
SYNOPSIS
#include <unistd.h>
unsigned
alarm(unsigned seconds);
DESCRIPTION
This interface is made obsolete by setitimer(2).
The alarm() function sets a timer to deliver the signal SIGALRM to the calling process after the specified number of seconds. If an alarm
has already been set with alarm() but has not been delivered, another call to alarm() will supersede the prior call. The request alarm(0)
voids the current alarm and the signal SIGALRM will not be delivered.
Due to setitimer(2) restriction the maximum number of seconds allowed is 100000000.
RETURN VALUES
The return value of alarm() is the amount of time left on the timer from a previous call to alarm(). If no alarm is currently set, the
return value is 0.
SEE ALSO setitimer(2), sigaction(2), sigpause(2), sigvec(2), signal(3), sleep(3), ualarm(3), usleep(3)HISTORY
An alarm() function appeared in Version 7 AT&T UNIX.
BSD April 19, 1994 BSD