hi,
i am getting this error while executing the script with cron:-
COMMON_ROOT=/files/common: is not an identifier
Manual run is ok, not getting any error. (2 Replies)
I use sed and awk. I am not a big expert but to some extent. I have file like this
PFA0165c ctg_6843
PFA0335w ctg_6843 ctg_6871 ctg_6977 ctg_6654 ctg_7052 ctg_6899 ctg_6840 ctg_7202 ctg_6638
PFA0155c ctg_6877 ctg_7169 ctg_7179 ctg_6843 ctg_6871
Now I want output like... (6 Replies)
Hello guys,
I need a script to get the common lines from two files with a criteria that if the first two columns match then I keep the maximum value of the 3rd column.(tab separated columns)
Sample input:
file1:
111 222 0.1
333 444 0.5
555 666 0.4
file 2:
111 222 0.7
555 666... (5 Replies)
Hi all,
This should be very easy but I can't figure it out...
I have a file that looks like this:
@SRR057408.1 FW8Y5CK02R652T length=34
AGCAGTGGTATCAACGCAGAGTAAGCAGTGGTAT
+SRR057408.1 FW8Y5CK02R652T length=34
FIIHFF6666?=:88@@@BBD:::?@ABBAAA>8
@SRR057408.2 FW8Y5CK02TBMHV length=52... (1 Reply)
Hello guys,
I need a script to get the common lines from two files with a criteria that if the first two columns match then I keep the maximum value of the 5th column.(tab separated columns) . 3rd and 4th columns corresponds to the row which has highest value for the 5th column.
Sample... (2 Replies)
Hi
I have 2 files with following data
First file,
sp|Q676U5|A16L1_HUMAN,
Autophagy-related protein 16-1 OS=Homo sapiens GN=ATG16L1 PE=1 SV=2,
Maximum coiled-coil residue probability: 0.657 in position 163.
Maximum dimeric residue probability: 0.288 in position 163.
... (1 Reply)
Hi,
I have a table to be imported for R as matrix or data.frame but I first need to edit it because I've got several lines with the same identifier (1st column), so I want to sum the each column (2nd -nth) of each identifier (1st column)
The input is for example, after sorted:
K00001 1 1 4 3... (8 Replies)
Hi All,
i have below two files.
FILE:
NAME="/dev/sda" TYPE="disk" SIZE="60G" OWNER="root" GROUP="disk" MODE="brw-rw----" PKNAME="" MOUNTPOINT=""
NAME="/dev/sda1" TYPE="part" SIZE="500M" OWNER="root" GROUP="disk" MODE="brw-rw----" PKNAME="/dev/sda" MOUNTPOINT="/boot"
NAME="/dev/sda2"... (3 Replies)
Discussion started by: balu1234
3 Replies
LEARN ABOUT MOJAVE
split
split(n) Tcl Built-In Commands split(n)
__________________________________________________________________________________________________________________________________________________NAME
split - Split a string into a proper Tcl list
SYNOPSIS
split string ?splitChars?
_________________________________________________________________DESCRIPTION
Returns a list created by splitting string at each character that is in the splitChars argument. Each element of the result list will con-
sist of the characters from string that lie between instances of the characters in splitChars. Empty list elements will be generated if
string contains adjacent characters in splitChars, or if the first or last character of string is in splitChars. If splitChars is an empty
string then each character of string becomes a separate element of the result list. SplitChars defaults to the standard white-space char-
acters.
EXAMPLES
Divide up a USENET group name into its hierarchical components:
split "comp.lang.tcl.announce" .
-> comp lang tcl announce
See how the split command splits on every character in splitChars, which can result in information loss if you are not careful:
split "alpha beta gamma" "temp"
-> al {ha b} {} {a ga} {} a
Extract the list words from a string that is not a well-formed list:
split "Example with {unbalanced brace character"
-> Example with {unbalanced brace character
Split a string into its constituent characters
split "Hello world" {}
-> H e l l o { } w o r l d
PARSING RECORD-ORIENTED FILES
Parse a Unix /etc/passwd file, which consists of one entry per line, with each line consisting of a colon-separated list of fields:
## Read the file
set fid [open /etc/passwd]
set content [read $fid]
close $fid
## Split into records on newlines
set records [split $content "
"]
## Iterate over the records
foreach rec $records {
## Split into fields on colons
set fields [split $rec ":"]
## Assign fields to variables and print some out...
lassign $fields
userName password uid grp longName homeDir shell
puts "$longName uses [file tail $shell] for a login shell"
}
SEE ALSO
join(n), list(n), string(n)
KEYWORDS
list, split, string
Tcl split(n)