|
|
Sponsored Content
Top Forums
Shell Programming and Scripting
Match part of string in file2 based on column in file1
Post 302813953 by Yoda on Tuesday 28th of May 2013 12:28:27 PM
|
|
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi, i've two files (file1, file2) i want to take value (in column1) and search in file2 if the they match print the value from file2.
this is what i have so far.
awk 'FILENAME=="file1"{ arr=$1 }
FILENAME=="file2"
{print $0}
' file1 file2 (2 Replies)
Discussion started by: myguess21
2 Replies
2. Shell Programming and Scripting
Hello: I have another question. Please consider the following two sample, tab-delimited files:
File_1:
Abf1 YKL112w
Abf1 YAL054c
Abf1 YGL234w
Ace2 YKL150w
Ace2 YNL328c
Cup9 YDR441c
Cup9 YDR442w
Cup9 YEL040w
...
File 2:
...
ABF1 YKL112W
ACE2 YLR131C (9 Replies)
Discussion started by: gstuart
9 Replies
3. Shell Programming and Scripting
Match column 3 in file1 to column 1 in file 2 and replace with column 2 from file2
file 1 sample
SNDK 80004C101 AT
XLNX 983919101 BB
NETL 64118B100 BS
AMD 007903107 CC
KLAC 482480100 DC
TER 880770102 KATS
ATHR 04743P108 KATS... (7 Replies)
Discussion started by: rydz00
7 Replies
4. Shell Programming and Scripting
hi;
i am looking for simple search script that find string from file1 in file 2
file 1 contain a loot of string like:
204080111111111
204080222222222
204080333333333
in each row
and i would like to take the first row for example 204080111111111 from file1 and find it in file2 when it... (1 Reply)
Discussion started by: kpinto
1 Replies
5. Shell Programming and Scripting
Hi,
I have file1 like this
aaa
ggg
ddd
vvv
eeeand file2
aaa 2
aaa 443
xxx 76
aaa 34
ggg 33
wee 99
ggg 33
ddd 1
ddd 10
ddd 98
sds 23 (4 Replies)
Discussion started by: polsum
4 Replies
6. UNIX for Dummies Questions & Answers
I have very limited coding skills but I'm wondering if someone could help me with this. There are many threads about matching strings in two files, but I have no idea how to add a column from one file to another based on a matching string.
I'm looking to match column1 in file1 to the number... (3 Replies)
Discussion started by: pathunkathunk
3 Replies
7. Shell Programming and Scripting
file1:
file2:
I need to find matches for any lines in file1 that appear in file2. Desired output is '>' plus the file1 term, followed by the line after the match in file2 (so the title is a little misleading):
This is honestly beyond what I can do without spending the whole night on it, so I'm... (2 Replies)
Discussion started by: pathunkathunk
2 Replies
8. Shell Programming and Scripting
I have two files.
File 1 is a two-column index file, e.g.
comp11084_c0_seq6:130-468(-) comp12746_c0_seq3:140-478(+)
comp11084_c0_seq3:201-539(-) comp12746_c0_seq2:191-529(+)
File 2 is a sequence file with headers named with the same terms that populate file 1. ... (1 Reply)
Discussion started by: pathunkathunk
1 Replies
9. Shell Programming and Scripting
I have a list of IDs in file1 and a list of sequences in file2. I can print sequences from file2, but I'm asking for help in printing the sequences in the same order as the IDs appear in file1.
file1:
EN_comp12952_c0_seq3:367-1668
ES_comp17168_c1_seq6:1-864
EN_comp13395_c3_seq14:231-1088... (5 Replies)
Discussion started by: pathunkathunk
5 Replies
10. Shell Programming and Scripting
I am trying to use awk to find all the $2 values in file2 which is ~30MB and tab-delimited, that are between $2 and $3 in file1 which is ~2GB and tab-delimited.
I have just found out that I need to use $1 and $2 and $3 from file1 and $1 and $2of file2 must match $1 of file1 and be in the range... (6 Replies)
Discussion started by: cmccabe
6 Replies
LEARN ABOUT SUSE
lintian-info
LINTIAN-INFO(1) User Contributed Perl Documentation LINTIAN-INFO(1) NAME
lintian-info - give detailed information about Lintian's error tags SYNOPSIS
lintian-info [log-file...] lintian-info --tags tag ... DESCRIPTION
The lintian-info command parses the output of the lintian command and gives verbose information about the listed Lintian error tags, parses a Lintian override file and gives verbose information about the tags included, or (if given the -t or --tags option) explains a given tag or tags. If no log-file is specified on the command line, this command expects its input on stdin. Thus, the output of lintian can either be piped through lintian-info or a log file produced by lintian can be processed with this command. (Note, though, that the lintian command has a command line option -i to display the same results as lintian-info, so you will not normally need to pipe the output of lintian into this command.) OPTIONS
-a, --annotate Read from standard input or any files specified on the command line and search the input for lines formatted like Lintian override entries. For each one that was found, display verbose information about that tag. -h, --help Display usage information and exit. --profile prof Use the severities from the vendor profile prof when displaying tags. If the profile name does not contain a slash, the default profile for than vendor is chosen. If not specified, lintian-info loads the best profile for the current vendor. Please Refer to the Lintian User Manual for the full documentation of profiles. -t, --tags Rather than treating them as log file names, treat any command-line options as tag names and display the descriptions of each tag. EXIT STATUS
If -t or --tags was given and one or more of the tags specified were unknown, this command returns the exit code 1. Otherwise, it always returns with exit code 0. SEE ALSO
lintian(1) AUTHORS
Niels Thykier <niels@thykier.net> Richard Braakman <dark@xs4all.nl> Christian Schwarz <schwarz@monet.m.isar.de> perl v5.14.2 2013-02-16 LINTIAN-INFO(1)