i would like to enter (user input) a bunch of numbers seperated by space:
10 15 20 25
and use awk to print out any lines in a file that have matching numbers
so output is:
22 44 66 55 (10) 77 (20)
(numbers 10 and 20 matched for example)
is this possible in awk . im using gawk for... (5 Replies)
Hi all, I need to category the processes in my system with awk. And for now, there are several command with similar name, so i have to match more than one pattern to pick it out. for instance:
binrundb
the string1, 2 & 3 may contain word, number, blank or "/". The "bin" should be ahead "rundb"... (5 Replies)
I am trying to break a string into separate fields and print the field that matches a pattern. I am using awk at the moment and have gotten this far:
awk '{for(i=1;i<=NF;++i)print "\t" $i}' longstring
This breaks the string into fields and prints each field on a separate line.
I want to add... (2 Replies)
Hi, I have 2 files that I have modified to basically match each other, however I want to determine what (if any) line in file 1 does not exist in file 2. I need to match column $1 and $2 as a single string in file1 to $1 and $2 in file2 as these two columns create a match.
I'm stuck in an AWK... (9 Replies)
Hi,
I have a tab delimited file "test.txt" like this:
id1 342 C/T
id2 7453 T/A/-/G/C
id3 531 T/C
id4 756 A/T/G
id5 23 A/G
id6 717 T/A/C
id7 718 C/T/A
And so on, with the possible choices for letters being A,C,T,G.
I would like to exclude from my file all the lines that do not have... (3 Replies)
Hello all. I am a beginner UNIX user who is using UNIX to work on a bioinformatics project for my university.
I have a bit of a complicated issue in trying to use sed (or awk) to "find and replace" bases (letters) in a genetics data spreadsheet (converted to a text file, can be either... (3 Replies)
Hello Guyz
I have been following this forum for a while and the solutions provided are super useful. I currently have a scenario where i need to search for a pattern and start searching by keeping the first pattern as a baseline
ABC
DEF
LMN
EFG
HIJ
LMN
OPQ
In the above text i need to... (8 Replies)
Hi everyone,
I am new to shell scripting, and would appreciate your help on following problem.
I need to search a file for a pattern, then get the number of each line that matches the given pattern.
Then I need to search those specific line numbers from the first file in a second file and... (6 Replies)
Trying to find out how to discover if the first 2 characters of a string are "22"
Not sure how.
I could use
if ]; then echo "yes";fi
But I think that will only grab the pattern 22 and not the first 2 digits. (5 Replies)
Hi!
I found and then adapt the code for my pipeline...
awk -F"," -vOFS="," '{printf "%0.2f %0.f\n",$2,$4}' xxx > yyy
I add -F"," -vOFS="," (for input and output as csv file) and I change the columns and the number of decimal...
It works but I have also some problems... here my columns
... (7 Replies)
Discussion started by: echo manolis
7 Replies
LEARN ABOUT MOJAVE
english
English(3pm) Perl Programmers Reference Guide English(3pm)NAME
English - use nice English (or awk) names for ugly punctuation variables
SYNOPSIS
use English;
use English qw( -no_match_vars ) ; # Avoids regex performance penalty
# in perl 5.16 and earlier
...
if ($ERRNO =~ /denied/) { ... }
DESCRIPTION
This module provides aliases for the built-in variables whose names no one seems to like to read. Variables with side-effects which get
triggered just by accessing them (like $0) will still be affected.
For those variables that have an awk version, both long and short English alternatives are provided. For example, the $/ variable can be
referred to either $RS or $INPUT_RECORD_SEPARATOR if you are using the English module.
See perlvar for a complete list of these.
PERFORMANCE
NOTE: This was fixed in perl 5.20. Mentioning these three variables no longer makes a speed difference. This section still applies if
your code is to run on perl 5.18 or earlier.
This module can provoke sizeable inefficiencies for regular expressions, due to unfortunate implementation details. If performance matters
in your application and you don't need $PREMATCH, $MATCH, or $POSTMATCH, try doing
use English qw( -no_match_vars ) ;
. It is especially important to do this in modules to avoid penalizing all applications which use them.
perl v5.18.2 2014-01-06 English(3pm)