i would like to enter (user input) a bunch of numbers seperated by space:
10 15 20 25
and use awk to print out any lines in a file that have matching numbers
so output is:
22 44 66 55 (10) 77 (20)
(numbers 10 and 20 matched for example)
is this possible in awk . im using gawk for... (5 Replies)
Hi all, I need to category the processes in my system with awk. And for now, there are several command with similar name, so i have to match more than one pattern to pick it out. for instance:
binrundb
the string1, 2 & 3 may contain word, number, blank or "/". The "bin" should be ahead "rundb"... (5 Replies)
I am trying to break a string into separate fields and print the field that matches a pattern. I am using awk at the moment and have gotten this far:
awk '{for(i=1;i<=NF;++i)print "\t" $i}' longstring
This breaks the string into fields and prints each field on a separate line.
I want to add... (2 Replies)
Hi, I have 2 files that I have modified to basically match each other, however I want to determine what (if any) line in file 1 does not exist in file 2. I need to match column $1 and $2 as a single string in file1 to $1 and $2 in file2 as these two columns create a match.
I'm stuck in an AWK... (9 Replies)
Hi,
I have a tab delimited file "test.txt" like this:
id1 342 C/T
id2 7453 T/A/-/G/C
id3 531 T/C
id4 756 A/T/G
id5 23 A/G
id6 717 T/A/C
id7 718 C/T/A
And so on, with the possible choices for letters being A,C,T,G.
I would like to exclude from my file all the lines that do not have... (3 Replies)
Hello all. I am a beginner UNIX user who is using UNIX to work on a bioinformatics project for my university.
I have a bit of a complicated issue in trying to use sed (or awk) to "find and replace" bases (letters) in a genetics data spreadsheet (converted to a text file, can be either... (3 Replies)
Hello Guyz
I have been following this forum for a while and the solutions provided are super useful. I currently have a scenario where i need to search for a pattern and start searching by keeping the first pattern as a baseline
ABC
DEF
LMN
EFG
HIJ
LMN
OPQ
In the above text i need to... (8 Replies)
Hi everyone,
I am new to shell scripting, and would appreciate your help on following problem.
I need to search a file for a pattern, then get the number of each line that matches the given pattern.
Then I need to search those specific line numbers from the first file in a second file and... (6 Replies)
Trying to find out how to discover if the first 2 characters of a string are "22"
Not sure how.
I could use
if ]; then echo "yes";fi
But I think that will only grab the pattern 22 and not the first 2 digits. (5 Replies)
Hi!
I found and then adapt the code for my pipeline...
awk -F"," -vOFS="," '{printf "%0.2f %0.f\n",$2,$4}' xxx > yyy
I add -F"," -vOFS="," (for input and output as csv file) and I change the columns and the number of decimal...
It works but I have also some problems... here my columns
... (7 Replies)
Discussion started by: echo manolis
7 Replies
LEARN ABOUT MINIX
grep
GREP(1) General Commands Manual GREP(1)NAME
grep - search a file for lines containing a given pattern
SYNOPSIS
grep [-elnsv] pattern [file] ...
OPTIONS -e-e pattern is the same as pattern
-c Print a count of lines matched
-i Ignore case
-l Print file names, no lines
-n Print line numbers
-s Status only, no printed output
-v Select lines that do not match
EXAMPLES
grep mouse file # Find lines in file containing mouse
grep [0-9] file # Print lines containing a digit
DESCRIPTION
Grep searches one or more files (by default, stdin) and selects out all the lines that match the pattern. All the regular expressions
accepted by ed and mined are allowed. In addition, + can be used instead of * to mean 1 or more occurrences, ? can be used to mean 0 or 1
occurrences, and | can be used between two regular expressions to mean either one of them. Parentheses can be used for grouping. If a
match is found, exit status 0 is returned. If no match is found, exit status 1 is returned. If an error is detected, exit status 2 is
returned.
SEE ALSO cgrep(1), fgrep(1), sed(1), awk(9).
GREP(1)