Hi,
Tried to look for solution, and found something similar but could not adapt the solution for my needs..
I'm trying to match a pattern (in this case "ProcessType")in a logfile, then delete that line and the 4 following lines.
The logfile looks as follows:
ProcessType: PROCESS_A... (5 Replies)
Hi Experts,
The question may look very silly by seeing the title, but please have a look at it clearly.
I have a text file where the first 5 columns in each row were supposed to be attributes of a sample(like sample name, number, status etc) and the next 25 columns are parameters on which... (3 Replies)
Hi experts a have a very large file and I need to add two columns: the first one numbering the incidence of records and the another with the total count
The input file:
21 2341 A
21 2341 A
21 2341 A
21 2341 C
21 2341 C
21 2341 C
21 2341 C
21 4567 A
21 4567 A
21 4567 C
... (6 Replies)
I'm working on a different stage of a project that someone helped me address elsewhere in these threads.
The .docs I'm cycling through look roughly like this:
1 of 26 DOCUMENTS
Copyright 2010 The Age Company Limited
All Rights Reserved
The Age (Melbourne, Australia)
November 27, 2010... (9 Replies)
Hi,
I'm using AIX(ksh shell).
> cat temp.txt
"a","b",0
"c",bc",0
"a1","b1",0
"cc","cb",1
"cc","b2",1
"bb","bc",2
I want the output as:
"a","b","c","bc","a1","b1"
"cc","cb","cc","b2"
"bb","bc"
I want to combine multiple lines into single line where third column is same.
Is... (1 Reply)
Hi! Is there a way to append column and row header to a file in awk script.
For example if I have
Jane F 39 manager
Carlos M 40 system administrator
Sam F 20 programmer
and I want it to be
# name gend age occup
1 Jane F 39 manager
2 Carlos M ... (4 Replies)
I am trying to match $1-$7 between the two files and if a match is found then the contents of $8 in file2 and copied over. The awk I tried is below. There is also a header row in file2 that has the Chr Start End Ref Alt that does not need to be searched. Thank you :).
awk
awk... (3 Replies)
I am just trying to insert the word "Index" using awk. The below is close but seems to add the word at the end and I can not get the syntax correct to add from the beginning. Thank you :).
awk -F'\t' -v OFS='\t' '{ $-1=$-1 OFS "Index"}$1=$1' file
current output
Chr Start End ... (3 Replies)
The awk below does put in VUS in the 9th field but I can not seem to skip the header then add the VUS. I tried to incorporate NR >=2 and NR > 1 with no luck. Thank you :).
input
Chr Start End Ref Alt Func.refGene PopFreqMax CLINSIG Classification
chr1 43395635 ... (5 Replies)
I have a file with 48 rows. I am counting 6 rows and adding 6 to that number and repeating the operation, and then output the value in column 1. For the second column, I would like to get sort of a binary output (1s and 2s) every 3rd row. This is what I have:
awk '{print ++src +... (1 Reply)
Discussion started by: Xterra
1 Replies
LEARN ABOUT OPENDARWIN
funtablerowget
funtablerowget(3) SAORD Documentation funtablerowget(3)NAME
FunTableRowGet - get Funtools rows
SYNOPSIS
#include <funtools.h>
void *FunTableRowGet(Fun fun, void *rows, int maxrow, char *plist,
int *nrow)
DESCRIPTION
The FunTableRowGet() routine retrieves rows from a Funtools binary table or raw event file, and places the values of columns selected by
FunColumnSelect() into an array of user structs. Selected column values are automatically converted to the specified user data type (and
to native data format) as necessary.
The first argument is the Fun handle associated with this row data. The second rows argument is the array of user structs into which the
selected columns will be stored. If NULL is passed, the routine will automatically allocate space for this array. (This includes proper
allocation of pointers within each struct, if the "@" pointer type is used in the selection of columns. Note that if you pass NULL in the
second argument, you should free this space using the standard free() system call when you are finished with the array of rows.) The third
maxrow argument specifies the maximum number of rows to be returned. Thus, if rows is allocated by the user, it should be at least of size
maxrow*sizeof(evstruct).
The fourth plist argument is a param list string. Currently, the keyword/value pair "mask=transparent" is supported in the plist argument.
If this string is passed in the call's plist argument, then all rows are passed back to the user (instead of just rows passing the filter).
This is only useful when FunColumnSelect() also is used to specify "$region" as a column to return for each row. In such a case, rows
found within a region have a returned region value greater than 0 (corresponding to the region id of the region in which they are located),
rows passing the filter but not in a region have region value of -1, and rows not passing any filter have region value of 0. Thus, using
"mask=transparent" and the returned region value, a program can process all rows and decide on an action based on whether a given row
passed the filter or not.
The final argument is a pointer to an int variable that will return the actual number of rows returned. The routine returns a pointer to
the array of stored rows, or NULL if there was an error. (This pointer will be the same as the second argument, if the latter is
non-NULL).
/* get rows -- let routine allocate the row array */
while( (buf = (Ev)FunTableRowGet(fun, NULL, MAXROW, NULL, &got)) ){
/* process all rows */
for(i=0; i<got; i++){
/* point to the i'th row */
ev = buf+i;
/* rearrange some values. etc. */
ev->energy = (ev->pi+ev->pha)/2.0;
ev->pha = -ev->pha;
ev->pi = -ev->pi;
}
/* write out this batch of rows */
FunTableRowPut(fun2, buf, got, 0, NULL);
/* free row data */
if( buf ) free(buf);
}
As shown above, successive calls to FunTableRowGet() will return the next set of rows from the input file until all rows have been read,
i.e., the routine behaves like sequential Unix I/O calls such as fread(). See evmerge example code for a more complete example.
Note that FunTableRowGet() also can be called as FunEventsGet(), for backward compatibility.
SEE ALSO
See funtools(7) for a list of Funtools help pages
version 1.4.2 January 2, 2008 funtablerowget(3)