It seems like there are 200 fields in that record. That does not seem that many fields. It runs fine here. I use gawk (GNU awk) on Linux. Is there any chance you are using the original awk version (old awk)? If yes, maybe that awk version has a limitation for number of fields, and any chance your computer has nawk (new awk) or gawk (GNU awk)? Most do. ---------- Post updated at 03:10 AM ---------- Previous update was at 02:45 AM ----------
Here's a way that does not depend on awk # of fields.
With original input:
With really long line:
Of course, if the input line is REALLY long, sed also would have a problem with it. If that happens, there is another solution, but no use going into that if the above shell script works, or if you can get an awk that allows more fields.
BTW, I tested gawk with 7198 fields, and no problem. I don't know what the maximum is.
Hi i have a file which has values seperated by "," as shown below and I want to transpose for every doc_id in one row.
Input:
DOC_ID,KEYWORD
105,REGISTROS
105,GEOLOGIA
105,NUCLEOS
105,EXPEDIENTE
105,PROGRAMAS
10025,EXPEDIENTE
10025,LOCALIZACIONES
10025,OFICIOS
10025,PROGRAMAS... (4 Replies)
Hi All,
I have been trying to transpose rows to column in an large file (about 15000 lines) between matching pattern. Searched all posts in this forum, but not able find the solution to my problem. Any help appreciated.!!
Input
/*------XXXXXX-------*/
owner: XXXX
location: XXXX... (3 Replies)
Hi Folks,
Iam a kinda newbie to unix shell scripting, the scenario is i have a text file containing the following info
Charlie chicago 15
Charlie newyork 26
jonny chicago 14
jonny newyork 15
joe chicago 15
joe newyork 18output should be
Name chicago ... (3 Replies)
Hi there,
I have a small csv file example below:
source,cu_001,cu_001_volume,cu_001_mass,cu_002,cu_002_volume,cu_002_mass,cu_003,cu_003_volume,cu_003_mass
ja116,1.33,3024000,9374400,1.54,3026200,9375123,1.98,3028000,9385512
I want to transpose columns to rows starting at the second... (3 Replies)
Hi All,
In shell, I have below data coming from some some text file as below:
. 351706 5861.8 0.026 0.012 12.584 0.026 0.012 12.582 0.000 0.000 0.000
Now i need the above data to be transposed as below
351706... (16 Replies)
I'm using the testawk.awk from the following thread
https://www.unix.com/shell-programming-and-scripting/18897-row-column-transpose.htmlI'm getting the following output
fieldname1 data1
fieldname2 data2
fieldname3 data3
How can I get like this instead
1 fieldname1 data1
2 fieldname2 data2... (1 Reply)
Gents,
Transpose from row to column, taking in consideration the first column, which contends the date.
Input file
72918,111000009,111000009,111000009,111000009,111000009,111000009,111000009,111000009,111000009
72918,2356,2357,2358,2359,2360,2361,2362,2363,2364
72918,0,0,0,0,0,0,0,0,0... (12 Replies)
Hello guys,
First of all happy holidays and happy new year.
I'm new in bioinformatic and also it is my first time that I write in this forum. Therefore, sorry if I make some mistakes.
I'm writing to ask your help to fix a problem:
I have a file like this:
gene1 GO:0016491|GO:0055114... (8 Replies)
Hi,
I have data in form of
A ram
B shyam
C seeta
D geeta
A bob
B methew
C Richad
D Mike
and i want it in this form.
A B C D
ram shyam seeta geeta
bob methew Richard Mike.
please help by providing the scripting for this. (3 Replies)