Hi, All
I have a huge file which has 450G. Its tab-delimited format is as below
x1 A 50020 1
x1 B 50021 8
x1 C 50022 9
x1 A 50023 10
x2 D 50024 5
x2 C 50025 7
x2 F 50026 8
x2 N 50027 1
:
:
Now, I want to extract a subset from this file. In this subset, column 1 is x10, column 2 is... (3 Replies)
Hello everyone. I'm new to the boards, I hope I can get and possibly give some help through these forums.
I need some help.
I have two CSV files, let's call them File A and File B.
This is the structure for File A:
ID, VAR1, VAR2, VAR3 - VAR50 (where the VAR 1-VAR50 are either 0 or 1)
... (1 Reply)
Hello. I was wondering if anyone could help. I have a file containing a large table in the format:
marker1 marker2 marker3 marker4
position1 position2 position3 position4
genotype1 genotype2 genotype3 genotype4
with marker being a name, position a numeric... (2 Replies)
Dear all,
I have a file lik below: n of row=420, n of letters in each row=100000 like below: there is no space between the letters.
what I want is: the 75000th letter to the 85000th letter in each row.
how to do that? thanks a lot!
... (2 Replies)
I am compiling a fortran program using gfortran and the result looks as below
I want to write a bash or awk script that will scan the information and output
only problems within a range of line numbers
Example: If I specify the file createmodl.f08, start line 1000 and end line 1100, I will... (8 Replies)
Each line of the file has some words exactly same letters as of the first one. But has zero or more "_+" inserted. I am interested in those words and remove the other cases.
Example:
abcde abcd_+e abcd_+de
fghig fghigi fghi_+g
klmn klmn
I want to get this:
abcde abcd_+e
fghig fghi_+g ... (7 Replies)
I do have a large matrix of the following format and it is tab delimited
ch-ab1-20 ch-bb2-23 ch-ab1-34 ch-ab1-24 er-cc1-45 bv-cc1-78
ch-ab1-20 0 2 3 4 5 6
ch-bb2-23 3 0 5 ... (6 Replies)
I need to know if file1 is a subset of file2 i.e all the contents of file1 are present in file2 or not.
Here is how i would do it.
Read line by line file1 and grep every line in file2 in a for loop. any failing grep would means that it is not a subset.
Is there a quicker or easier way... (3 Replies)
In-order to check and print if file2 is a subset of file one i do the below.
var1=$(cat //tmp/file1 | sort -u | wc)
var2=$(cat /tmp/file2 /tmp/file1 | sort -u | wc)
if ; then
echo "file2 is a subset of file1 becoz var1 and var2 have the same values."
fi
However, i get the following error ... (1 Reply)