Here is a start in awk you could try. The first file is read twice solely to determine the number of records..
You could embed it in a shell loop that increases the iter variable ( -v iter="$loopvar" )
--
Quote:
Originally Posted by Don Cragun
In you output samples, the lines in each set of output files are all in the order in which they appeared in the input files. Is that a requirement for your output, or is it just a coincidence in the random numbers used for your example?
With truly random numbers, the output could contain more than one copy of some output lines. Is it a requirement that the output lines be unique?
Isn't that a matter of sampling with/without replacement?
Last edited by Scrutinizer; 03-28-2013 at 11:13 AM..
Reason: Added parentheses to rand and stand, to make it work in gawk
I've been working on getting a script to take size, dir name and file name variables from an input file and creating the same dir structure along with the file of specific size.
An example of the input file:
size/dirname/filename
2100/JAN_06/12345ABC.TCC
2354/FEB_06/24564XYZ.NOS... (2 Replies)
I have a directory of files that look like filename 001.ext, filename 002.ext, etc. I'd like to rename the files with unique random numbered names, so that the original filenames are stripped and the files are given a new, random number name. I'm not super new to UNIX, but I don't often use it for... (2 Replies)
Hi,
I've list of files in a directory, which have date stamp value in their names.
ex:
abc_data_20071102.csv,
abc_data_20091221.csv,
abc_data_20100110.csv,
abc_data_20100222.csv,
abc_data_20080620.csv,... etc.,
I need to select and process only files, within the given date... (4 Replies)
My files look like this
And I need to cut the sequences at the last "A" found in the following 'pattern' -highlighted for easier identification, the pattern is the actual file is not highlighted.
The expected result should look like this
Thus, all the sequences would end with AGCCCTA... (2 Replies)
My file looks like this
But I need to remove the entry with the identifier >Reference1 along with the entire sequence. Thus, I will end up having the following file
Thanks in advance! (2 Replies)
I have two files with thousands of sequences of different lengths. infile1 contains the actual sequences and infile2 the scores for each A, T, G and C in infile1. Something like this:
infile1:
>HZVJKYI01ECH5R
TTGATGTGCCAGCTGCCGTTGGTGTGCCAA
>HZVJKYI01AQWJ8
GGATATGATGATGAACTGGTTTGGCACACC... (4 Replies)
I have two directories Dir_A and Dir_A_Arc. Need help with a shell script.
The shell script needs to take the path to these two directories as parameters $1 and $2.
The script needs to check if any files exist in these directories and if either of the directories are empty then exit... (5 Replies)
Hello All,
May i please know how do i ensure my split command would NOT generate incomplete output files like below, the last lines in each file is missing some columns or last line is complete.
split -b 50GB File File_
File_aa
|551|70210203|xxxxxxx|12/22/2010 20:44:58|11/01/2010... (1 Reply)
Hi,
I have to add 7 bases of specific nucleotide at the beginning and ending of all the fasta sequences of a file. For example, I have a multi fasta file namely test.fasta as given below
test.fasta
>TalAA18_Xoo_CIAT_NZ_CP033194.1:_2936369-2939570:+1... (1 Reply)
Discussion started by: dineshkumarsrk
1 Replies
LEARN ABOUT SUSE
gtk2::treestore
Gtk2::TreeStore(3) User Contributed Perl Documentation Gtk2::TreeStore(3)NAME
Gtk2::TreeStore
HIERARCHY
Glib::Object
+----Gtk2::TreeStore
INTERFACES
Gtk2::TreeModel
Gtk2::TreeDragSource
Gtk2::TreeDragDest
Gtk2::TreeSortable
Gtk2::Buildable
METHODS
treestore = Gtk2::TreeStore->new (...)
o ... (list) of strings, package names
treeiter = $tree_store->append ($parent)
o $parent (Gtk2::TreeIter or undef)
$tree_store->clear
$tree_store->set_column_types (...)
o ... (list) of strings, package names
$tree_store->set ($iter, $col1, $val1, ...)
o $iter (Gtk2::TreeIter)
o $col1 (integer) the first column number
o $val1 (scalar) the first value
o ... (list) pairs of columns and values
treeiter = $tree_store->insert ($parent, $position)
o $parent (Gtk2::TreeIter or undef)
o $position (integer)
treeiter = $tree_store->insert_after ($parent, $sibling)
o $parent (Gtk2::TreeIter or undef)
o $sibling (Gtk2::TreeIter or undef)
treeiter = $tree_store->insert_before ($parent, $sibling)
o $parent (Gtk2::TreeIter or undef)
o $sibling (Gtk2::TreeIter or undef)
treeiter = $tree_store->insert_with_values ($parent, $position, ...)
o $parent (Gtk2::TreeIter or undef)
o $position (integer) position to insert the new row
o ... (list) pairs of column numbers and values
Like doing insert followed by set, except that insert_with_values emits only the row-inserted signal, rather than row-inserted, row-
changed, and, if the store is sorted, rows-reordered as in the multiple-operation case. Since emitting the rows-reordered signal
repeatedly can affect the performance of the program, insert_with_values should generally be preferred when inserting rows in a sorted tree
store.
Since: gtk+ 2.10
boolean = $tree_store->is_ancestor ($iter, $descendant)
o $iter (Gtk2::TreeIter)
o $descendant (Gtk2::TreeIter)
integer = $tree_store->iter_depth ($iter)
o $iter (Gtk2::TreeIter)
boolean = $tree_store->iter_is_valid ($iter)
o $iter (Gtk2::TreeIter)
Since: gtk+ 2.2
$tree_store->move_after ($iter, $position)
o $iter (Gtk2::TreeIter)
o $position (Gtk2::TreeIter or undef)
Since: gtk+ 2.2
$tree_store->move_before ($iter, $position)
o $iter (Gtk2::TreeIter)
o $position (Gtk2::TreeIter or undef)
Since: gtk+ 2.2
treeiter = $tree_store->prepend ($parent)
o $parent (Gtk2::TreeIter or undef)
boolean = $tree_store->remove ($iter)
o $iter (Gtk2::TreeIter)
$tree_store->reorder ($parent, ...)
o $parent (Gtk2::TreeIter or undef)
o ... (list) of integer's, the new_order
Since: gtk+ 2.2
$tree_store->swap ($a, $b)
o $a (Gtk2::TreeIter)
o $b (Gtk2::TreeIter)
Since: gtk+ 2.2
$tree_store->set_value ($iter, $col1, $val1, ...)
o $iter (Gtk2::TreeIter)
o $col1 (integer) the first column number
o $val1 (scalar) the first value
o ... (list) pairs of columns and values
Alias for Gtk2::TreeStore::set().
SEE ALSO
Gtk2, Glib::Object
COPYRIGHT
Copyright (C) 2003-2008 by the gtk2-perl team.
This software is licensed under the LGPL. See Gtk2 for a full notice.
perl v5.12.1 2010-07-05 Gtk2::TreeStore(3)