If "169_(-)_comp100001_c0_seq1" is always third field in your file2 based on delimiter colon and you have two fields "169_(-)_" before "comp100001_c0_seq1", then try this else modify the command accordingly to your input
Hi All,
as you can see I'm pretty new to this board. :D
I'm struggling around with small script to search a few fields in another file.
Basically I have file1 looking like this:
15:38:28 sz:10001 pr:14.16
15:38:28 sz:10002 pr:18.41
15:38:29 sz:10003 pr:19.28
15:38:30 sz:10004... (1 Reply)
File1 row is same as column 2 in file 2.
Also file 2 will either start with A, B or C.
And 3rd column in file 2 is always F2.
When column 2 of file 2 matches file1 column, print all those rows into a separate file.
Here is an example.
file 1:
100
103
104
108
file 2:
... (6 Replies)
Match column 3 in file1 to column 1 in file 2 and replace with column 2 from file2
file 1 sample
SNDK 80004C101 AT
XLNX 983919101 BB
NETL 64118B100 BS
AMD 007903107 CC
KLAC 482480100 DC
TER 880770102 KATS
ATHR 04743P108 KATS... (7 Replies)
I have very limited coding skills but I'm wondering if someone could help me with this. There are many threads about matching strings in two files, but I have no idea how to add a column from one file to another based on a matching string.
I'm looking to match column1 in file1 to the number... (3 Replies)
I have a file containing texts and indexes. I need the text between (and including ) INDEX and number "1" alone in line. I have managed this:
awk '/INDEX/,/1$/{if (!/1$/)print}' file1.txt
It works for all indexes.
And then I have second file with years and indexes per year, one per line... (3 Replies)
Hello,
I have two files file 1 and file 2 each having result of a query on certain database tables and need to compare for Col1 in file1 with Col3 in file2, compare Col2 with Col4 and output the value of Col1 from File1 which is a) not present in Col3 of File2 b) value of Col2 is different from... (2 Replies)
I have two files.
File 1 is a two-column index file, e.g.
comp11084_c0_seq6:130-468(-) comp12746_c0_seq3:140-478(+)
comp11084_c0_seq3:201-539(-) comp12746_c0_seq2:191-529(+)
File 2 is a sequence file with headers named with the same terms that populate file 1. ... (1 Reply)
I have a list of IDs in file1 and a list of sequences in file2. I can print sequences from file2, but I'm asking for help in printing the sequences in the same order as the IDs appear in file1.
file1:
EN_comp12952_c0_seq3:367-1668
ES_comp17168_c1_seq6:1-864
EN_comp13395_c3_seq14:231-1088... (5 Replies)
I want to print only the lines in file2 that match file1, in the same order as they appear in file 1
file1
file2
desired output:
I'm getting the lines to match
awk 'FNR==NR {a++}; FNR!=NR && a' file1 file2
but they are in sorted order, which is not what I want:
Can anyone... (4 Replies)
Discussion started by: pathunkathunk
4 Replies
LEARN ABOUT DEBIAN
combine
COMBINE(1)COMBINE(1)NAME
combine - combine sets of lines from two files using boolean operations
SYNOPSIS
combine file1 and file2
combine file1 not file2
combine file1 or file2
combine file1 xor file2
_ file1 and file2 _
_ file1 not file2 _
_ file1 or file2 _
_ file1 xor file2 _
DESCRIPTION
combine combines the lines in two files. Depending on the boolean operation specified, the contents will be combined in different ways:
and Outputs lines that are in file1 if they are also present in file2.
not Outputs lines that are in file1 but not in file2.
or Outputs lines that are in file1 or file2.
xor Outputs lines that are in either file1 or file2, but not in both files.
"-" can be specified for either file to read stdin for that file.
The input files need not be sorted, and the lines are output in the order they occur in file1 (followed by the order they occur in file2
for the two "or" operations). Bear in mind that this means that the operations are not commutative; "a and b" will not necessarily be the
same as "b and a". To obtain commutative behavior sort and uniq the result.
Note that this program can be installed as "_" to allow for the syntactic sugar shown in the latter half of the synopsis (similar to the
test/[ command). It is not currently installed as "_" by default, but you can alias it to that if you like.
SEE ALSO join(1)AUTHOR
Copyright 2006 by Joey Hess <joey@kitenet.net>
Licensed under the GNU GPL.
moreutils 2012-04-09 COMBINE(1)