I would like to remove characters from column 7 so that from an input file looking like this:
>HWI-EAS422_12:4:1:69:89 GGTTTAAATATTGCACAAAAGGTATAGAGCGT U0 1 0 0 ref_chr8.fa 6527777 F DD
I get something like that in an output file:
... (13 Replies)
I have a large text-file with tab-delimited genetic data that looks like:
KSC112 KSC234 0 0 1 1 A G C T
I simply wan to delete the first column, but since the file has 600 000 columns, it is not possible with awk (seems to be limited at 32k columns).
Does anyone have an idea how to do this? (2 Replies)
I want to add a new column to a tab delimited text file. It will be the first column and it will just be 1's. How do I go about doing that? Thanks! (1 Reply)
Hi all,
I'm new to Unix and work primarily in bioinformatics. I am in need of a script which will allow me to replace "1" with "chr1" in only the first column of a file which looks like such:
1 10327 rs112750067 T C . PASS ASP;RSPOS=10327;... (4 Replies)
I have a file which looks like this:
73450 articles and news developmental psychology 2006-03-30 16:22:40 1 http://www.usnews.com
73450 articles and news developmental psychology 2006-03-30 16:22:40 2 http://www.apa.org
73450 articles and news developmental psychology 2006-03-30... (1 Reply)
I have a file having the following entries:
test1 test2 test3
11 22 33
22 44 66
99 99 44
---
I want to add a column so that the above file becomes:
test1 test2 test3 notest
11 22 33 *
22 44 66 *
99 99 44 *
---
Thanks (6 Replies)
I am fairly new to programming and trying to resolve this problem. I have the file like this.
CHROM POS REF ALT 10_sample.bam 11_sample.bam 12_sample.bam 13_sample.bam 14_sample.bam 15_sample.bam 16_sample.bam
tg93 77 T C T T T T T
tg93 79 ... (4 Replies)
Hi all ,
I have a file having 12 columns tab delimited .
I need to read this file and remove the column 3 and column 4 and insert a word in column 3 as "AVIALABLE "
Is there a way to do this . I am trying like below
Thanks
DJ
cat $FILENAME|awk -F"\t" '{ print $1 "\t... (3 Replies)
Hello Everyone..
I want to replace the retail col from FileI with cstp1 col from FileP if the strpno matches in both files
FileP.txt
... (2 Replies)
Discussion started by: YogeshG
2 Replies
LEARN ABOUT DEBIAN
finance::quote::tiaacref
Finance::Quote::Tiaacref(3pm) User Contributed Perl Documentation Finance::Quote::Tiaacref(3pm)NAME
Finance::Quote::Tiaacref - Obtain quote from TIAA-CREF.
SYNOPSIS
use Finance::Quote;
$q = Finance::Quote->new;
%stockinfo = $q->fetch("tiaacref","TIAAreal");
DESCRIPTION
This module obtains information about TIAA-CREF managed funds.
The following symbols can be used:
Stock: CREFstok
Money Market: CREFmony
Equity Index: CREFequi
Inf-Linked Bond: CREFinfb
Bond Market: CREFbond
Social Choice: CREFsoci
Global Equities: CREFglob
Growth: CREFgrow
TIAA Real Estate: TIAAreal
PA Stock Index: TIAAsndx
PA Select Stock: TLSIX
PA Select Growth Equity: TLGEX
PA Select Growth Income: TLGIX
PA Select Int'l Equity: TLIEX
PA Select Social Choice: TLSCX
PA Select Large Cap Value: TLLCX
PA Select Small Cap Equity: TLCEX
PA Select Real Estate: TLREX
TIAA-CREF Money Market: TIAXX
TIAA-CREF Bond Plus: TIPBX
TIAA-CREF High-Yield Bond: TCHYX
TIAA-CREF Inflation-Linked Bond: TCILX
TIAA-CREF Short-Term Bond: TCSTX
TIAA-CREF Tax-Exempt Bond: TCTEX
TIAA-CREF Real Estate Securities: TCREX
TIAA-CREF Equity Index: TCEIX
TIAA-CREF Growth Equity: TIGEX
TIAA-CREF Growth & Income: TIGIX
TIAA-CREF International Equity: TIINX
TIAA-CREF Large-Cap Value: TCLCX
TIAA-CREF Mid-Cap Growth: TCMGX
TIAA-CREF Mid-Cap Value: TCMVX
TIAA-CREF Small-Cap Equity: TCSEX
TIAA-CREF Social Choice Equity: TCSCX
TIAA-CREF Managed Allocation: TIMAX
This module is loaded by default on a Finance::Quote object. It's also possible to load it explicitly by passing "Tiaacref" in to the
argument argument list of Finance::Quote->new().
Information returned by this module is governed by TIAA-CREF's terms and conditions.
LABELS RETURNED
The following labels may be returned by Finance::Quote::Tiaacref: symbol, exchange, name, date, nav, price.
SEE ALSO
TIAA-CREF, http://www.tiaa-cref.org/
perl v5.14.2 2012-05-06 Finance::Quote::Tiaacref(3pm)