Sponsored Content
Top Forums Shell Programming and Scripting Match ids and print original file Post 302777523 by anbu23 on Friday 8th of March 2013 04:28:30 AM
Old 03-08-2013
Code:
$ awk ' NR == FNR && NR > 1 { arr[$2]=$3; next } FNR>1{ printf("%s",$0); if(arr[$2] == ""){ print " NULL"}else{print " "arr[$2]} } ' freq orig
chr1 879108 NULL
chr1 881918 0.007
chr1 896874 NULL

 

10 More Discussions You Might Find Interesting

1. UNIX for Dummies Questions & Answers

print remaining part from the first-match within a file

Hi, i was looking for unix command(s) for : find the first occurrence of a given pattern with in a file and print the remaining part. below is an example of what i am looking for: lets say, a file named myfile.txt now, the command i am looking for will do the following (4 Replies)
Discussion started by: nurulamin862
4 Replies

2. Shell Programming and Scripting

Strings from one file which exactly match to the 1st column of other file and then print lines.

Hi, I have two files. 1st file has 1 column (huge file containing ~19200000 lines) and 2nd file has 2 columns (small file containing ~6000 lines). ################################# huge_file.txt a a ab b ################################## small_file.txt a 1.5 b 2.5 ab ... (4 Replies)
Discussion started by: AshwaniSharma09
4 Replies

3. Shell Programming and Scripting

print when column match with other file

Hello all, please help. There are two file like this: file1: 1197510.0 294777.7 9666973.0 21.6 1839.8 1197510.0 294777.7 9666973.0 413.2 2075.9 1197510.0 294777.7 9666973.0 689.3 2260.0 ... (1 Reply)
Discussion started by: attila
1 Replies

4. UNIX for Dummies Questions & Answers

Match values/IDs from column and text files

Hello, I am trying to modify 2 files, to yield results in a 3rd file. File-1 is a 8-columned file, separted with tab. 1234:1 xyz1234 blah blah blah blah blah blah 1234:1 xyz1233 blah blah blah blah blah blah 1234:1 abc1234 blah blah blah blah blah blah n/a RRR0000 blah blah blah... (1 Reply)
Discussion started by: ad23
1 Replies

5. Shell Programming and Scripting

AWK print and retain original format

I have a file with very specific column spacing formatting, I wish to do the following: awk '{print $1, $2, $3, $4, $5, $6, $19-$7, $20-$8, $21-$9, $10, $11, $12}' merge.pdb > vector.pdb but the format gets ruined. I have tried with print -f but to no avail.... (7 Replies)
Discussion started by: chrisjorg
7 Replies

6. Shell Programming and Scripting

Match and print columns in second file

Hi All, I have to match each row in file 1 with 1st row in file 2 and print the corresponding column from file2. I am trying to use an awk script to do this. For example cat File1 X1 X3 X4 cat File2 ID X1 X2 X3 X4 A 1 6 2 1 B 2 7 3 3 C 3 8 4 1 D 4 9 1 1 (3 Replies)
Discussion started by: newpro
3 Replies

7. Shell Programming and Scripting

Match ids

Hello, I have two files File 1 with 10 columns rsid position ........ xx 1:10000 File 2 position 1:10000 2:2000 .... I need to extract the IDs given in file 2(column1) from file 1 (column2) and print all columns from file1. I am trying this command (1 Reply)
Discussion started by: nans
1 Replies

8. UNIX for Beginners Questions & Answers

Count multiple columns and print original file

Hello, I have two tab files with headers File1: with 4 columns header1 header2 header3 header4 44 a bb 1 57 c ab 4 64 d d 5 File2: with 26 columns header1.. header5 header6 header7 ... header 22...header26 id1 44 a bb id2 57 ... (6 Replies)
Discussion started by: nans
6 Replies

9. UNIX for Beginners Questions & Answers

Match duplicate ids in two files

I have two text files. File 1 has 150 ids but all the ids exists in duplicates so it has 300 ids in total. File 2 has 1500 ids but all exists in duplicates so file 2 has 300 ids in total. i want to match the first occurance of every id in file 1 with first occurance of thet id in file 2 and 2nd... (2 Replies)
Discussion started by: limd
2 Replies

10. Shell Programming and Scripting

awk to print match or non-match and select fields/patterns for non-matches

In the awk below I am trying to output those lines that Match between file1 and file2, those Missing in file1, and those missing in file2. Using each $1,$2,$4,$5 value as a key to match on, that is if those 4 fields are found in both files the match, but if those 4 fields are not found then missing... (0 Replies)
Discussion started by: cmccabe
0 Replies
PG_FETCH_ARRAY(3)														 PG_FETCH_ARRAY(3)

pg_fetch_array - Fetch a row as an array

SYNOPSIS
array pg_fetch_array (resource $result, [int $row], [int $result_type = PGSQL_BOTH]) DESCRIPTION
pg_fetch_array(3) returns an array that corresponds to the fetched row (record). pg_fetch_array(3) is an extended version of pg_fetch_row(3). In addition to storing the data in the numeric indices (field number) to the result array, it can also store the data using associative indices (field name). It stores both indicies by default. Note This function sets NULL fields to the PHP NULL value. pg_fetch_array(3) is NOT significantly slower than using pg_fetch_row(3), and is significantly easier to use. PARAMETERS
o $result - PostgreSQL query result resource, returned by pg_query(3), pg_query_params(3) or pg_execute(3) (among others). o $row - Row number in result to fetch. Rows are numbered from 0 upwards. If omitted or NULL, the next row is fetched. o $result_type - An optional parameter that controls how the returned array is indexed. $result_type is a constant and can take the following values: PGSQL_ASSOC, PGSQL_NUM and PGSQL_BOTH. Using PGSQL_NUM, pg_fetch_array(3) will return an array with numerical indices, using PGSQL_ASSOC it will return only associative indices while PGSQL_BOTH, the default, will return both numerical and associa- tive indices. RETURN VALUES
An array indexed numerically (beginning with 0) or associatively (indexed by field name), or both. Each value in the array is represented as a string. Database NULL values are returned as NULL. FALSE is returned if $row exceeds the number of rows in the set, there are no more rows, or on any other error. EXAMPLES
Example #1 pg_fetch_array(3) example <?php $conn = pg_pconnect("dbname=publisher"); if (!$conn) { echo "An error occurred. "; exit; } $result = pg_query($conn, "SELECT author, email FROM authors"); if (!$result) { echo "An error occurred. "; exit; } $arr = pg_fetch_array($result, 0, PGSQL_NUM); echo $arr[0] . " <- Row 1 Author "; echo $arr[1] . " <- Row 1 E-mail "; // As of PHP 4.1.0, the row parameter is optional; NULL can be passed instead, // to pass a result_type. Successive calls to pg_fetch_array will return the // next row. $arr = pg_fetch_array($result, NULL, PGSQL_ASSOC); echo $arr["author"] . " <- Row 2 Author "; echo $arr["email"] . " <- Row 2 E-mail "; $arr = pg_fetch_array($result); echo $arr["author"] . " <- Row 3 Author "; echo $arr[1] . " <- Row 3 E-mail "; ?> SEE ALSO
pg_fetch_row(3), pg_fetch_object(3), pg_fetch_result(3). PHP Documentation Group PG_FETCH_ARRAY(3)
All times are GMT -4. The time now is 04:24 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy