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Full Discussion: Displaying log file pattern output in tabular form output
Top Forums Shell Programming and Scripting Displaying log file pattern output in tabular form output Post 302764145 by Optimus81 on Friday 1st of February 2013 02:59:49 AM
Old 02-01-2013
Thanks bipinajith.

I add line to handle conditions properly but somehow it takes the No Result count as 3 though it should be 1 (point 9, this should be in No Result count since there is no Passed/Failed string).

more over, for Failed count, it shows 3 instead of 5 this is where am getting confused. why is it missing to count another 2 as Failed status. Is that because of (point 4 and 5 , which is out of line)

Code:
if(s=="Passed") ++p; if(s=="Failed") ++f; if((s!="Passed")&& (s!="Failed")||(s=="") ) ++n;


ouput we get now is :
Code:
root@OPT # ./output.sh
|========================================|
|        Consolidated Report Status      |
|========================================|
|   SI No     CHECKS           STATUS    |
|========================================|
|------------------------------------------|
| 1). Interface Checking  : Passed   |
|------------------------------------------|
|------------------------------------------|
| 2). OS version Checking  : Passed   |
|------------------------------------------|
|------------------------------------------|
| 3). Comp running check  : Failed   |
|------------------------------------------|
|------------------------------------------|
| 4). Verify Server Connection, for ADD/ZDZ/IDD components  :           Failed   |
|------------------------------------------|
|------------------------------------------|
| 5). Verify Service Availability, for PZPZS or ADD/ZDZ or IDD/DDM or ALRZX  : Failed   |
|------------------------------------------|
|------------------------------------------|
| 6). Verify Resiliency  : Failed   |
|------------------------------------------|
|------------------------------------------|
| 7). Verify mon component  : Passed   |
|------------------------------------------|
|------------------------------------------|
| 8). Checking the Core file  :  Failed   |
|------------------------------------------|
|------------------------------------------|
| 9). Data request checking and Usage collection checking  : Please execute /tmp/TestPerm.bash script   |
|------------------------------------------|
|========================================|
| Total e[1;32;40m Passed: 3         |
| Total e[1;31;40m Failed: 3           |
| Total No Result:    3                   |
| Total Executed: 9                      |
|========================================|

---------- Post updated 01-02-13 at 02:59 AM ---------- Previous update was 31-01-13 at 03:40 AM ----------

Hi bipinajith/All,
Can you please explain the below line of code, I will try to sort out other issues
Code:
printf "| %s ",$0; getline; s=$0; sub(/:.*/,"",s);

 

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LEARN ABOUT DEBIAN

bp_search2tribe

BP_SEARCH2TRIBE(1p)					User Contributed Perl Documentation				       BP_SEARCH2TRIBE(1p)

NAME

       search2tribe - Turn SearchIO parseable reports(s) into TRIBE matrix

SYNOPSIS

       Usage:
	 search2tribe [-o outputfile] [-f reportformat] [-w/--weight] file1 file2 ..

DESCRIPTION

       This script is probably too slow for most people's uses.  It is better to use something like scripts/searchio/fastam9_to_table, -m 9 output
       from BLAST, or the blast2table from the BLAST O'Reilly book to get a tabular output from these programs and then feed the table into MCL
       with the mcxdeblast script and the --m9 option.

       This script will turn a protein Search report (BLASTP, FASTP, SSEARCH) into a Markov Matrix for TribeMCL clustering.

       The options are:

	  -o filename	       - the output filename [default STDOUT]
	  -f format	       - search result format (blast, fasta)
				 (ssearch is fasta format). default is blast.
	  -w or --weight VALUE - Change the default weight for E(0.0) hits
				 to VALUE (default=200 (i.e. 1e-200) )
	  -h		       - this help menu

       Additionally specify the filenames you want to process on the command-line.  If no files are specified then STDIN input is assumed.  You
       specify this by doing: search2tribe < file1 file2 file3

AUTHOR

       Jason Stajich, jason-at-bioperl-dot-org

perl v5.14.2							    2012-03-02						       BP_SEARCH2TRIBE(1p)
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