Hi,
I have two files. 1st file has 1 column (huge file containing ~19200000 lines) and 2nd file has 2 columns (small file containing ~6000 lines).
#################################
huge_file.txt
a
a
ab
b
##################################
small_file.txt
a 1.5
b 2.5
ab ... (4 Replies)
hello,
I had posted earlier help for a script for splitting concatenated words . The script was supposed to read words from a master file and split concatenated words in the slave/input file.
Thanks to the help I got, the following script which works very well was posted. It detects residues by... (14 Replies)
Hi,
I have a file filled with search strings which have a blank in between and look like this:
S. g. Ehr.
o. Jg.
v. d. Chijs
g. Ehr.
Now i would like to search for the strings and it also shall return the next column after the match.
awk -v FILE="search_strings.txt" 'BEGIN {... (10 Replies)
I have a file with many lines which contain strings like .. etc.
But with no rule regarding field separators or anything else.
I want to print ONLY THE STRING from each line , not the entire line !!!
For example from the lines :
Flow on service executed with success in . Performances... (5 Replies)
Hi
I have a problem where I have a large amount of files that I need to scan and return a line and its following line, but only when the following line begins with a string.
String one - line one must begin with 'Bill'
String two - line two must begin with 'Jones'.
If these two... (7 Replies)
URGENT HELP IS NEEDED!!
I am looking to move matching lines (01 - 07) from File1 and 77 tab the matching string from File2, to File3.txt. I am almost done but
- Currently, script is not printing lines to File3.txt in order.
- Also the matching lines are not moving out of File1.txt
... (1 Reply)
Hello,
I have a file contains two columns. I need to print the lines after “xxx” so i'm trying to match "xxx" & cut the lines after that. I'm trying with the grep & cut command, if there any simple way to extract this please help me.
Sample file :
name id
AAA 123
AAB 124
AAC 125... (4 Replies)
Trying to use awk to match the contents of each line in file1 with $5 in file2. Both files are tab-delimited and there may be a space or special character in the name being matched in file2, for example in file1 the name is BRCA1 but in file2 the name is BRCA 1 or in file1 name is BCR but in file2... (6 Replies)
In the awk below, what I am attempting to do is check each line in the tab-delimeted input, which has ~20 lines in it, for a keyword
SVTYPE=Fusion. If the keyword is found I am splitting $3 using the . (dot) and reading the portion before and after the dot in an array a.
If it does have that... (12 Replies)
In the awk below I am trying to output those lines that Match between file1 and file2, those Missing in file1, and those missing in file2. Using each $1,$2,$4,$5 value as a key to match on, that is if those 4 fields are found in both files the match, but if those 4 fields are not found then missing... (0 Replies)
Discussion started by: cmccabe
0 Replies
LEARN ABOUT OSX
join
JOIN(1) BSD General Commands Manual JOIN(1)NAME
join -- relational database operator
SYNOPSIS
join [-a file_number | -v file_number] [-e string] [-o list] [-t char] [-1 field] [-2 field] file1 file2
DESCRIPTION
The join utility performs an ``equality join'' on the specified files and writes the result to the standard output. The ``join field'' is
the field in each file by which the files are compared. The first field in each line is used by default. There is one line in the output
for each pair of lines in file1 and file2 which have identical join fields. Each output line consists of the join field, the remaining
fields from file1 and then the remaining fields from file2.
The default field separators are tab and space characters. In this case, multiple tabs and spaces count as a single field separator, and
leading tabs and spaces are ignored. The default output field separator is a single space character.
Many of the options use file and field numbers. Both file numbers and field numbers are 1 based, i.e., the first file on the command line is
file number 1 and the first field is field number 1. The following options are available:
-a file_number
In addition to the default output, produce a line for each unpairable line in file file_number.
-e string
Replace empty output fields with string.
-o list
The -o option specifies the fields that will be output from each file for each line with matching join fields. Each element of list
has the either the form 'file_number.field', where file_number is a file number and field is a field number, or the form '0' (zero),
representing the join field. The elements of list must be either comma (',') or whitespace separated. (The latter requires quoting
to protect it from the shell, or, a simpler approach is to use multiple -o options.)
-t char
Use character char as a field delimiter for both input and output. Every occurrence of char in a line is significant.
-v file_number
Do not display the default output, but display a line for each unpairable line in file file_number. The options -v 1 and -v 2 may be
specified at the same time.
-1 field
Join on the field'th field of file 1.
-2 field
Join on the field'th field of file 2.
When the default field delimiter characters are used, the files to be joined should be ordered in the collating sequence of sort(1), using
the -b option, on the fields on which they are to be joined, otherwise join may not report all field matches. When the field delimiter char-
acters are specified by the -t option, the collating sequence should be the same as sort(1) without the -b option.
If one of the arguments file1 or file2 is ``-'', the standard input is used.
EXIT STATUS
The join utility exits 0 on success, and >0 if an error occurs.
COMPATIBILITY
For compatibility with historic versions of join, the following options are available:
-a In addition to the default output, produce a line for each unpairable line in both file 1 and file 2.
-j1 field
Join on the field'th field of file 1.
-j2 field
Join on the field'th field of file 2.
-j field
Join on the field'th field of both file 1 and file 2.
-o list ...
Historical implementations of join permitted multiple arguments to the -o option. These arguments were of the form
'file_number.field_number' as described for the current -o option. This has obvious difficulties in the presence of files named
'1.2'.
These options are available only so historic shell scripts do not require modification. They should not be used in new code.
LEGACY DESCRIPTION
The -e option causes a specified string to be substituted into empty fields, even if they are in the middle of a line. In legacy mode, the
substitution only takes place at the end of a line.
Only documented options are allowed. In legacy mode, some obsolete options are re-written into current options.
For more information about legacy mode, see compat(5).
SEE ALSO awk(1), comm(1), paste(1), sort(1), uniq(1), compat(5)STANDARDS
The join command conforms to IEEE Std 1003.1-2001 (``POSIX.1'').
BSD July 5, 2004 BSD