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Top Forums Shell Programming and Scripting Retreiving multiple files by changing a parameter with one program Post 302757585 by bioinfo on Thursday 17th of January 2013 05:25:26 PM
Old 01-17-2013
Retreiving multiple files by changing a parameter with one program

Hi all,
I am using following command:
Code:
perl program.pl input.txt output.txt  CUTOFF 3 > groups_3.txt

containing program.pl, two files (input.txt, output.txt) and getting output in groups_3.txt:

But, I wish to have 30 files corresponding to each CUTOFF ranging from 0 to 30 using the same program.pl, two files (input.txt, output.txt), because with each value of CUTOFF I will get different number of groups in each output file. In other words, I want to call program.pl using input.txt output.txt with different CUTOFF.

Thanks
 

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Perl::Critic::Policy::InputOutput::ProhibitTwoArgOpen(3pUser Contributed Perl DocumentatPerl::Critic::Policy::InputOutput::ProhibitTwoArgOpen(3pm)

NAME
Perl::Critic::Policy::InputOutput::ProhibitTwoArgOpen - Write "open $fh, q{<}, $filename;" instead of "open $fh, "<$filename";". AFFILIATION
This Policy is part of the core Perl::Critic distribution. DESCRIPTION
The three-argument form of "open" (introduced in Perl 5.6) prevents subtle bugs that occur when the filename starts with funny characters like '>' or '<'. The IO::File module provides a nice object-oriented interface to filehandles, which I think is more elegant anyway. open( $fh, '>output.txt' ); # not ok open( $fh, q{>}, 'output.txt' ); # ok use IO::File; my $fh = IO::File->new( 'output.txt', q{>} ); # even better! It's also more explicitly clear to define the input mode of the file, as in the difference between these two: open( $fh, 'foo.txt' ); # BAD: Reader must think what default mode is open( $fh, '<', 'foo.txt' ); # GOOD: Reader can see open mode This policy will not complain if the file explicitly states that it is compatible with a version of perl prior to 5.6 via an include statement, e.g. by having "require 5.005" in it. CONFIGURATION
This Policy is not configurable except for the standard options. NOTES
There are two cases in which you are forced to use the two-argument form of open. When re-opening STDIN, STDOUT, or STDERR, and when doing a safe pipe open, as described in perlipc. SEE ALSO
IO::Handle IO::File AUTHOR
Jeffrey Ryan Thalhammer <jeff@imaginative-software.com> COPYRIGHT
Copyright (c) 2005-2011 Imaginative Software Systems. All rights reserved. This program is free software; you can redistribute it and/or modify it under the same terms as Perl itself. perl v5.14.2 2012-06-07 Perl::Critic::Policy::InputOutput::ProhibitTwoArgOpen(3pm)
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