sat_1_g3_g_0_8540 . A 1 15501 . . . ID=sat_1_g3_g_0_8540;parentName=sat_1_g3_g_0_8540;Al=sat_1_g2_g_0_8540;
sat_1_g3_g_2_8510 . C 1 25501 . . . ID=sat_1_g3_g_2_8510;parentName=sat_1_g3_g_2_8510;Al=sat_1_g1_g_2_8510;
I want it to look like
Code:
string_8540 . A 1 15501 . . . ID=sat_1_g3_g_0_8540;parentName=sat_1_g3_g_0_8540;Al=sat_1_g2_g_0_8540;
string_8510 . C 1 25501 . . . ID=sat_1_g3_g_2_8510;parentName=sat_1_g3_g_2_8510;Al=sat_1_g1_g_2_8510;
i dont want the names to be replaced in the ID, parent name and AL column .
I tried doing selective replace using a tab as a function but it still didnt work.
The command I used is
Code:
sed 's/^sat_1_g3_g_0\t/string\t/' infile >sortedfile
sed 's/^sat_1_g3_g_2\t/string\t/' infile >sortedfile
Please tell how can i correct it.
Thanks
Moderator's Comments:
Please use code tags next time for your code and data.
Hi,
We have umask 022 in /etc/profile for security reasons.
But I want have some other umask for selected users. how to achieve this?
Regards (3 Replies)
hi all
from below text
"abcd,SYS_12345,xyz,PQR, ,"
I want to print only
"abcd,SYS,xyz,PQR, ,"
i.e. taking only first three 3 chars from 2 string of comma separated file
thanks (4 Replies)
Hello,
I have been using the command below for file manipulation.
while read A B; do grep $f1; done < f2 > f3
So, if a certain string is found in f2 (for ex; DOG243435) and it is also present in f1, then print that string plus the contents of the line in which it was found onto f3.
... (6 Replies)
Hi all
:wall:
Can anyone advise how do I use ls to do a selective amd sorted listing of file that I want to have as below?
Am looking for files that are named as log_<nnnn>.txt, where <nnnn> are numeric, i.e. I want to have a listing sorted from the newest to the oldest of files that... (7 Replies)
I have to grep out only email address from a column. It has characters appended and prepended
F=<sss1@domain.com>
<sss2@domain.com>
(sss3@domain.com)
<sss4@domain.com>
Whatever added before and after email, I should be able to grep out only emails. (9 Replies)
Hello all. I am a beginner UNIX user who is using UNIX to work on a bioinformatics project for my university.
I have a bit of a complicated issue in trying to use sed (or awk) to "find and replace" bases (letters) in a genetics data spreadsheet (converted to a text file, can be either... (3 Replies)
Hi, I have the following data:
2860377|"DATA1"|"DATA2"|"65343"|"DATA2"|"DATA4"|"11"|"DATA5"|"DATA6"|"65343"|"DATA7"|"0"|"8"|"1"|"NEGATIVE"
32340377|"DATA1"|"DATA2"|"65343"|"DATA2"|"DATA4"|"11"|"DATA5"|"DATA6"|"65343"|"DATA7"|"0"|"8"|"1"|"NEG-DID"... (3 Replies)
Hi
My input file looks like this:
>BAHMI01000090.1 Details of the shopping list 9800 item00090, whole set of listed artifacts and objects
>BAHMI01050012.1 Details of the shopping list 9800 item02310, whole set of listed artifacts and objects
>BAHMI01070078.1 Details of the shopping list ... (5 Replies)
Discussion started by: sonia102
5 Replies
LEARN ABOUT MOJAVE
locale::codes::langfam5.18
Locale::Codes::LangFam(3pm) Perl Programmers Reference Guide Locale::Codes::LangFam(3pm)NAME
Locale::Codes::LangFam - standard codes for language extension identification
SYNOPSIS
use Locale::Codes::LangFam;
$lext = code2langfam('apa'); # $lext gets 'Apache languages'
$code = langfam2code('Apache languages'); # $code gets 'apa'
@codes = all_langfam_codes();
@names = all_langfam_names();
DESCRIPTION
The "Locale::Codes::LangFam" module provides access to standard codes used for identifying language families, such as those as defined in
ISO 639-5.
Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default ISO 639-5
language family codes will be used.
SUPPORTED CODE SETS
There are several different code sets you can use for identifying language families. A code set may be specified using either a name, or a
constant that is automatically exported by this module.
For example, the two are equivalent:
$lext = code2langfam('apa','alpha');
$lext = code2langfam('apa',LOCALE_LANGFAM_ALPHA);
The codesets currently supported are:
alpha
This is the set of three-letter (lowercase) codes from ISO 639-5 such as 'apa' for Apache languages.
This is the default code set.
ROUTINES
code2langfam ( CODE [,CODESET] )
langfam2code ( NAME [,CODESET] )
langfam_code2code ( CODE ,CODESET ,CODESET2 )
all_langfam_codes ( [CODESET] )
all_langfam_names ( [CODESET] )
Locale::Codes::LangFam::rename_langfam ( CODE ,NEW_NAME [,CODESET] )
Locale::Codes::LangFam::add_langfam ( CODE ,NAME [,CODESET] )
Locale::Codes::LangFam::delete_langfam ( CODE [,CODESET] )
Locale::Codes::LangFam::add_langfam_alias ( NAME ,NEW_NAME )
Locale::Codes::LangFam::delete_langfam_alias ( NAME )
Locale::Codes::LangFam::rename_langfam_code ( CODE ,NEW_CODE [,CODESET] )
Locale::Codes::LangFam::add_langfam_code_alias ( CODE ,NEW_CODE [,CODESET] )
Locale::Codes::LangFam::delete_langfam_code_alias ( CODE [,CODESET] )
These routines are all documented in the Locale::Codes::API man page.
SEE ALSO
Locale::Codes
The Locale-Codes distribution.
Locale::Codes::API
The list of functions supported by this module.
http://www.loc.gov/standards/iso639-5/id.php
ISO 639-5 .
AUTHOR
See Locale::Codes for full author history.
Currently maintained by Sullivan Beck (sbeck@cpan.org).
COPYRIGHT
Copyright (c) 2011-2013 Sullivan Beck
This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
perl v5.18.2 2013-11-04 Locale::Codes::LangFam(3pm)
01-14-2013
