Sponsored Content
Top Forums Shell Programming and Scripting Compare & subtract lines in files by column using awk. Post 302755233 by RudiC on Saturday 12th of January 2013 09:52:45 AM
Old 01-12-2013
The specification is a bit vague, pls be more specific AND use code tags as advised! From what I infer from your samples, try:
Code:
$ awk 'NR==FNR{Ar[$1$2$4$5]++;next} !(($1$2$4$5) in Ar)' file2 file1
18    12842    .    G    A    82.02    .    AC=1;AF=0. . . .

 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

awk compare column between 2 files

Hi, I would like to compare file1 and file2 file1 1 2 3 file2 1 a 2 b 3 c 4 d The result should only print out "d" in file 2. Thanks (3 Replies)
Discussion started by: phamp008
3 Replies

2. Shell Programming and Scripting

awk to compare lines of two files and print output on screen

hey guys, I have two files both with two columns, I have already created an awk code to ignore certain lines (e.g lines that start with 963) as they wou ld begin with a certain string, however, the rest I have added together and calculated the average. At the moment the code also displays... (3 Replies)
Discussion started by: chlfc
3 Replies

3. UNIX for Advanced & Expert Users

Compare two files using awk or sed, add values in a column if their previous fields are same

Hi All, I have two files file1: abc,def,ghi,5,jkl,mno pqr,stu,ghi,10,vwx,xyz cba,ust,ihg,4,cdu,oqw file2: ravi,def,kishore ramu,ust,krishna joseph,stu,mike I need two output files as follows In my above example, each row in file1 has 6 fields and each row in file2 has 3... (1 Reply)
Discussion started by: yerruhari
1 Replies

4. UNIX for Dummies Questions & Answers

Compare two files using awk or sed, add values in a column if their previous fields are same

Hi All, I have two files file1: abc,def,ghi,5,jkl,mno pqr,stu,ghi,10,vwx,xyz cba,ust,ihg,4,cdu,oqw file2: ravi,def,kishore ramu,ust,krishna joseph,stu,mike I need two output files as follows In my above example, each row in file1 has 6 fields and each row in file2 has 3... (1 Reply)
Discussion started by: yerruhari
1 Replies

5. Shell Programming and Scripting

How to subtract the adjacent lines from a single column?

Hi All, I have a file with only one column and i need to subtract the adjacent lines of the same column and print it in the same column. For Example: (Input) Col1 5 10 12 6 9 12 5 . . . .output should be like this: (12 Replies)
Discussion started by: Fredrick
12 Replies

6. Shell Programming and Scripting

How to compare the values of a column in awk in a same file and consecutive lines..

I would like to compare the values of 2nd column of consecutive lines of same file in such a way so that if the difference between first value and second value is more than 100 it should print complete line else ignore line. Input File ========== PDB 2500 RTDB 123 RTDB-EAGLE 122 VSCCP 2565... (4 Replies)
Discussion started by: manuswami
4 Replies

7. Shell Programming and Scripting

Compare files & extract column awk

I have two tab delimited files as given below: File_1: PV16 E1 865 2814 1950 PV16 E2 2756 3853 1098 PV16 E4 3333 3620 288 PV16 E5 3850 4101 252 PV16 E6 83 559 477 PV16 E7 562 858 297 PV16 L2 4237 5658 ... (10 Replies)
Discussion started by: vaibhavvsk
10 Replies

8. UNIX for Dummies Questions & Answers

awk command to compare files by column

So I have this issue. I have 4 files. the first one is the master file who has all possible combinations: file 1 - a - b - c - d - e the other three have some of the letters and a number instead of - for example file 2 34 a 5 c file 3 10 b 12 ... (3 Replies)
Discussion started by: Quijotes
3 Replies

9. Shell Programming and Scripting

Compare two files column values using awk

Judi # cat File1 judi /export/home 76 judi /usr 83 judi # judi # cat File2 judi /export/home 79 judi /usr 82 judi # if COLUMN3 of File2 is greater that COLUMN3 of File1, then print File2's lines juid /export/home 79 Code tags please (2 Replies)
Discussion started by: judi
2 Replies

10. Shell Programming and Scripting

Need awk or Shell script to compare Column-1 of two different CSV files and print if column-1 matche

Example: I have files in below format file 1: zxc,133,joe@example.com cst,222,xyz@example1.com File 2 Contains: hxd hcd jws zxc cst File 1 has 50000 lines and file 2 has around 30000 lines : Expected Output has to be : hxd hcd jws (5 Replies)
Discussion started by: TestPractice
5 Replies
COMM(1) 						    BSD General Commands Manual 						   COMM(1)

NAME
comm -- select or reject lines common to two files SYNOPSIS
comm [-123i] file1 file2 DESCRIPTION
The comm utility reads file1 and file2, which should be sorted lexically, and produces three text columns as output: lines only in file1; lines only in file2; and lines in both files. The filename ``-'' means the standard input. The following options are available: -1 Suppress printing of column 1. -2 Suppress printing of column 2. -3 Suppress printing of column 3. -i Case insensitive comparison of lines. Each column will have a number of tab characters prepended to it equal to the number of lower numbered columns that are being printed. For example, if column number two is being suppressed, lines printed in column number one will not have any tabs preceding them, and lines printed in column number three will have one. The comm utility assumes that the files are lexically sorted; all characters participate in line comparisons. ENVIRONMENT
The LANG, LC_ALL, LC_COLLATE, and LC_CTYPE environment variables affect the execution of comm as described in environ(7). EXIT STATUS
The comm utility exits 0 on success, and >0 if an error occurs. SEE ALSO
cmp(1), diff(1), sort(1), uniq(1) STANDARDS
The comm utility conforms to IEEE Std 1003.2-1992 (``POSIX.2''). The -i option is an extension to the POSIX standard. HISTORY
A comm command appeared in Version 4 AT&T UNIX. BUGS
Input lines are limited to LINE_MAX (2048) characters in length. BSD
January 26, 2005 BSD
All times are GMT -4. The time now is 12:57 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy