Hi All,
I have used this forum many times to solve my many scripting problems. This time, I would like to seek some answers to a problem that I've been head scratching quite a bit on.
My Example:
I am converting a 2000-byte file into a 300-byte file
this file has no delimiters and hardly any... (3 Replies)
Hi All,
I am trying to load a data from a files in a particular directory to a database..
cd $SCC
isql metdb >> ${LOGDATA}/LOAD.LOG < !
load from "${LDATA}/${FORM}.ld" insert into $LOADTABLE
!
But it's showing the error "syntax error at line 46 : `<<' unmatched"
Can u plz help me... (5 Replies)
Hi
I would like to know how to load oracle data to unix flat file using a shell script.
Can we use sqlldr to import data from oracle, if so can anyone help me with it. (2 Replies)
I have a flat file with records like
Header
123 James Williams Finance2000
124 Pete Pete HR 1500
125 PatrickHeather Engg 3000
Footer
The structure is:
Eno:4 characters
Name:8 characters
Surname : 9 characters
Dept:7 characters
Sal:4characters
These are sample... (1 Reply)
Hi everyone!!
I need help regarding this.
How can we load data from DB2 Database tables into a Comma Separated File?
I also have another Question? Using Shell scripting, Is it easy to read Data from a table or from a text file?
It is very urgent for me. Please help me out guys.
... (1 Reply)
I have a file something like this:aaaa.xml content of the file is
0,<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<storeInformation xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
<s>
<BRANCH_NO>3061</BRANCH_NO>
<BRANCH_NAME>GREEN EXPRESS</BRANCH_NAME> ... (4 Replies)
I have a requirement to read the xml file and split the files into two diffrent files in Unix shell script. Could anyone please help me out with this requirement.
Sample file
---------------
0,<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<Information... (3 Replies)
Hello,
please help me an the below issue.
i need to check whether data is available or not in a flat file generated by oracle
(sometimes sql didn't any records) to overcome this.
without opening flat file.
Thanks....... (1 Reply)
Hi,
I have a flaty file from which i am fetching few columns in tablular form as below code.
Now i want to fetch the column 6 and 7 in below code only if it either of them is non zero.However below startement
awk -F, '$6==0 && $7==0{exit 1}' ${IFILE}
is not working..Not sure where is the... (36 Replies)
Discussion started by: Vivekit82
36 Replies
LEARN ABOUT DEBIAN
bp_bioflat_index
BP_BIOFLAT_INDEX(1p) User Contributed Perl Documentation BP_BIOFLAT_INDEX(1p)NAME
bioflat_index.pl - index sequence files using Bio::DB::Flat
DESCRIPTION
Create or update a biological sequence database indexed with the
Bio::DB::Flat indexing scheme. The arguments are a list of flat files
containing the sequence information to be indexed.
USAGE
bioflat_index.pl <options> file1 file2 file3...
Options:
--create Create or reinitialize the index. If not specified,
the index must already exist.
--format <format> The format of the sequence files. Must be one
of "genbank", "swissprot", "embl" or "fasta".
--location <path> Path to the directory in which the index files
are stored.
--dbname <name> The symbolic name of the database to be created.
--indextype <type> Type of index to create. Either "bdb" or "flat".
"binarysearch" is the same as "flat".
Options can be abbreviated. For example, use -i for --indextype.
The following environment variables will be used as defaults if the corresponding options are not provided:
OBDA_FORMAT format of sequence file
OBDA_LOCATION path to directory in which index files are stored
OBDA_DBNAME name of database
OBDA_INDEX type of index to create
perl v5.14.2 2012-03-02 BP_BIOFLAT_INDEX(1p)