Login or Register to Ask a Question and Join Our Community

Sponsored Content
Full Discussion: [SOLVED] Converting data from one format to the other
Top Forums Shell Programming and Scripting [SOLVED] Converting data from one format to the other Post 302742751 by rdrtx1 on Tuesday 11th of December 2012 01:53:49 PM
Old 12-11-2012
try:
Code:
awk '
BEGIN {
  OFS="\t";
  print "family","rep","generation","gene","value";
}
/generation/ {for (i=2; i<=NF; i++) gn[i]=$i; next;}
$1 == "gene" {fm=$2; sub("-[^-]*$","",fm);
  par=fm;
  sub("-.*","", par);
  for (i=2; i<=NF; i++) {
    if ($i ~ /Par/) {gn[i]=$i; sub("-.*","",gn[i]);}
    sub(".*_","",$i);rp[i]=$i
  }; next;
}
{ for (i=2; i<=NF; i++ ) {
   print fm, rp[i], gn[i], $1, $i;
  }
}
' OFS="\t" input

This User Gave Thanks to rdrtx1 For This Post:
newbie83
 

10 More Discussions You Might Find Interesting

1. UNIX for Dummies Questions & Answers

converting a tabular format data to comma seperated data in KSH

Hi, Could anyone help me in changing a tabular format output to comma seperated file pls in K-sh. Its very urgent. E.g : username empid ------------------------ sri 123 to username,empid sri,123 Thanks, Hema:confused: (2 Replies)
Discussion started by: Hemamalini
2 Replies

2. Shell Programming and Scripting

Converting windows format file to unix format using script

Hi, I am having couple of files which i used to copy from windows to Linux, so now in case of text files (CTRL^M) appears at end of line. I know i can convert this windows format file to unix format file by running dos2unix. My requirement here is that i want to do it automatically using a... (5 Replies)
Discussion started by: sarbjit
5 Replies

3. Shell Programming and Scripting

Converting the date format

Hi All, I am new to this forum. Could anyone help me to resolve the following issue. Input of the flat file contains several lines of text for example find below: 5022090,2,4,7154,88,,,,,4/1/2011 0:00,Z,L,2 5022090,3,1,6648,88,,,,,4/1/2011 0:00,Z,,1 5022090,4,1,6648,88,,,,,4/1/2011... (6 Replies)
Discussion started by: av_sagar
6 Replies

4. Shell Programming and Scripting

Converting variable space width data into CSV data in bash

Hi All, I was wondering how I can convert each line in an input file where fields are separated by variable width spaces into a CSV file. Below is the scenario what I am looking for. My Input data in inputfile.txt 19 15657 15685 Sr2dReader 107.88 105.51... (4 Replies)
Discussion started by: vharsha
4 Replies

5. Shell Programming and Scripting

[Solved] Converting the data into matrix with 0's and 1's

I have a file that contains 2 columns tag,pos cat input_file tag pos atg 10 ata 16 agt 15 agg 19 atg 17 agg 14 I have used following command to sort the file based on second column sort -k 2 input_file tag pos atg 10 agg 14 agt 15 ata 16 agg 19 atg 17 (2 Replies)
Discussion started by: raj_k
2 Replies

6. Shell Programming and Scripting

Converting text files to xls through awk script for specific data format

Dear Friends, I am in urgent need for awk/sed/sh script for converting a specific data format (.txt) to .xls. The input is as follows: >gi|1234|ref| Query = 1 - 65, Target = 1677 - 1733 Score = 8.38, E = 0.6529, P = 0.0001513, GC = 46 fd sdfsdfsdfsdf fsdfdsfdfdfdfdfdf... (6 Replies)
Discussion started by: Amit1
6 Replies

7. Shell Programming and Scripting

Need help in converting the file format

Hi All, I need help in converting the mentioned file format into desired output format using awk. Could anyone help me in this? Below is the input.. Date Account Campaign AdGroup Keyword Conversion Revenue Var1 Var2 Var3 Var4 Var5 10 20 30 ... (8 Replies)
Discussion started by: Ravi S M
8 Replies

8. Programming

Visual Basic converting a decimal data type to a label with currency format

Here is the code that I am working with. I have tried several other things. any suggestions? Lbl_Cost_Output.Text = (dDistance * dCostPerMile).ToString("C") The label is formatted correctly in terms of value 0.00 but no dollar sign appears. Please let me know if you have any questions. (1 Reply)
Discussion started by: briandanielz
1 Replies

9. Shell Programming and Scripting

Converting another line to another format

Hi there, How can i shorten this: grep -ri "Password must meet complexity requirements" "$line" | sed 's/\t/<\/td><td>/' | sed 's/^.*:/<tr><td>/'| sed 's/$/<\/td><\/tr>/' I am looking for a shorter alternative of sed. What I was trying to do is to change the string output format from ... (3 Replies)
Discussion started by: alvinoo
3 Replies

10. UNIX for Dummies Questions & Answers

Converting unstructured data to structured data

Hi, Can someone help in converting the below unstructured data to a CSV format please. { "branchId" : "BNSFGDJNSJG-73264HB-132131BNHJFSDG", "branchName" : "NEWYORK-SSDF", "branchProductId" : "72Y5HFHSF7H3RUNAWEF", "PreferenceId" : "BASDBVcbzcYHcb", "emailId" :... (9 Replies)
Discussion started by: naveen.kuppili
9 Replies

LEARN ABOUT LINUX

psc

PSC(1)							      General Commands Manual							    PSC(1)

NAME

       psc - prepare sc files

SYNOPSIS

       psc [-fLkrSPv] [-s cell] [-R n] [-C n] [-n n] [-d c]

DESCRIPTION

       Psc  is used to prepare data for input to the spreadsheet calculator sc(1).  It accepts normal ascii data on standard input.  Standard out-
       put is a sc file.  With no options, psc starts the spreadsheet in cell A0.  Strings are right justified.  All data on a line is entered	on
       the  same row; new input lines cause the output row number to increment by one.	The default delimiters are tab and space.  The column for-
       mats are set to one larger than the number of columns required to hold the largest value in the column.

OPTIONS

       -f     Omit column width calculations.  This option is for preparing data to be merged with an existing spreadsheet.  If the option is  not
	      specified, the column widths calculated for the data read by psc will override those already set in the existing spreadsheet.

       -L     Left justify strings.

       -k     Keep  all  delimiters.   This  option  causes the output cell to change on each new delimiter encountered in the input stream.   The
	      default action is to condense multiple delimiters to one, so that the cell only changes once per input data item.

       -r     Output the data by row first then column.  For input consisting of a single column, this option will result in  output  of  one  row
	      with multiple columns instead of a single column spreadsheet.

       -s cell
	      Start  the  top  left  corner  of the spreadsheet in cell.  For example, -s B33 will arrange the output data so that the spreadsheet
	      starts in column B, row 33.

       -R n   Increment by n on each new output row.

       -C n   Increment by n on each new output column.

       -n n   Output n rows before advancing to the next column.  This option is used when the input is  arranged  in  a  single  column  and  the
	      spreadsheet is to have multiple columns, each of which is to be length n.

       -d c   Use the single character c as the delimiter between input fields.

       -P     Plain numbers only.  A field is a number only when there is no imbedded [-+eE].

       -S     All numbers are strings.

       -v     Print the version of psc

SEE ALSO

       sc(1)

AUTHOR

       Robert Bond

PSC 7.16							 19 September 2002							    PSC(1)
All times are GMT -4. The time now is 01:15 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy