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Full Discussion: Merge files
Top Forums UNIX for Dummies Questions & Answers Merge files Post 302736589 by fadista on Tuesday 27th of November 2012 02:45:48 PM
Old 11-27-2012
Merge files

Hi,

I would like to know how can I merge files based on their coordinates, but mantaining the score of each file in the output file like:

Note: 1st column is for chromosome, 2nd for start, 3rd for end of segment, 4th for score

file1:
Code:
1 200 300 20
1 400 500 30

file2:
Code:
1 200 350 30
1 400 600 10

file3:
Code:
1 200 300 40

Desired output file:
(Note: 1st column is for chromosome, 2nd for start, 3rd for end of segment, 4th-to-last column is for score of each file)

Code:
1 200 300 20 30 40
1 400 500 30 10 0

Many thanks!
 

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SVK::Merge::Info(3)					User Contributed Perl Documentation				       SVK::Merge::Info(3)

NAME
SVK::Merge::Info - Container for merge ticket information SYNOPSIS
use SVK::Merge::Info; my $minfo = SVK::Merge::Info->new( $svk_merge_property ); DESCRIPTION
An "SVK::Merge::Info" object represents a collection of merge tickets, including repository UUID, path and revision. CONSTRUCTORS
new Takes a single argument with the value of an "svk:merge" property. METHODS
add_target Add a single SVK::Target::Universal or SVK::Path to the collection of merge tickets. del_target Remove a single SVK::Target::Universal or SVK::Path from the collection of merge tickets. remove_duplicated Takes a single SVK::Merge::Info object as an argument. Removes merge tickets which are present in the argument and for which the argument's revision is less than or equal to our revision. subset_of Takes a single SVK::Merge::Info object as an argument. Returns true if our set of merge tickets is a subset of the argument's merge tickets. Otherwise, returns false. is_equal Takes a single SVK::Merge::Info object as an argument. Returns true if our set of merge tickets is equal to argument's. Otherwise, returns false. union Return a new SVK::Merge::Info object representing the union of ourself and the SVK::Merge::Info object given as the argument. resolve verbatim as_string Serializes this collection of merge tickets in a form suitable for storing as an svk:merge property. TODO
Document the merge and ticket tracking mechanism. SEE ALSO
SVK::Editor::Merge, SVK::Command::Merge, Star-merge from GNU Arch perl v5.10.0 2008-08-04 SVK::Merge::Info(3)
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