Hi,
I trying to find the solution for writing the programming in unix by shell programming for sorting thr string in alphabetical order.
I getting diffculty in that ,, so i want to find out the solution for that
Please do needful
Thanks
Bhagyesh (1 Reply)
Hi everyone!
I am new to the forum and have recently started working with Linux.
Quick question, I want a user list in alphabetical order as the output of a shell script.
Who can help me!?
Thanks!
From the netherlands ;) (5 Replies)
I've looking over a script for work and I've had a problem with the script not listing the files in alphabetical order. To look up PIDs for apps, it would be beneficial to have them listed in that order. Here is what I've been reviewing.
#!/usr/bin/perl
$str = sprintf "%4s %-40s", "PID",... (7 Replies)
Hi All,
I have one file containing thousands of table names in single column. Now I want that file split into multiple files e.g one file containing table names starting from A, other containing all tables starting from B...and so on..till Z.
I tried below but it did not work.
for i in... (6 Replies)
I have an interactive script which works terrific at processing a folder of unsorted files into new directories.
I am wondering how I could modify my script so that( upon execution) it provides an additional labelled summary file on my desktop that lists all of the files in each directory that... (4 Replies)
Discussion started by: Braveheart
4 Replies
LEARN ABOUT DEBIAN
bio::phenotype::mesh::term
Bio::Phenotype::MeSH::Term(3pm) User Contributed Perl Documentation Bio::Phenotype::MeSH::Term(3pm)NAME
Bio::Phenotype::MeSH::Term - A MeSH term
SYNOPSIS
use Bio::Phenotype::MeSH::Term;
# create a term object
my $term = Bio::Phenotype::MeSH::Term->new
(-id => 'D000001',
-name => 'Dietary Fats',
-description => 'dietary fats are...'
);
# get a Bio::Phenotype::MeSH::Twig somehow...
$term->add_twig($twig1);
DESCRIPTION
This class keeps information about MeSH terms. MeSH stands for Medical Subject Headings and is one of the ways for annotaing biomedical
literature. The terminology is maintained by National Library of Medicine of USA . See http://www.nlm.nih.gov/mesh/meshhome.html.
In addition to id, name and description a term can know about its surrounding terms (Bio::Phenotype::MeSH::Twig) in the term hierarchy.
This class is mainly used from Bio::DB::MeSH which retrieves terms over the Web.
SEE ALSO
Bio::DB::MeSH, Bio::Phenotype::MeSH::Twig
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing lists Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR
Heikki Lehvaslaiho, heikki-at-bioperl-dot-org
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
id
Title : id
Usage : $obj->id( "r1" );
or
print $obj->id();
Function: Set/get for the id.
Returns : A id [scalar].
Args : A id [scalar] (optional).
name
Title : name
Usage : $obj->name( "r1" );
or
print $obj->name();
Function: Set/get for the name.
Returns : A name [scalar].
Args : A name [scalar] (optional).
description
Title : description
Usage : $obj->description( "r1" );
or
print $obj->description();
Function: Set/get for the description.
Returns : A description [scalar].
Args : A description [scalar] (optional).
add_synonym
Title : add_synonym
Usage : $obj->add_synonym( @synonyms );
or
$obj->add_synonym( $synonym );
Function: Pushes one or more synonyms for the term term
into the list of synonyms.
Returns :
Args : scalar(s).
each_synonym
Title : each_synonym()
Usage : @gs = $obj->each_synonym();
Function: Returns a list of gene symbols [scalars, most likely Strings]
associated with this phenotype.
Returns : A list of scalars.
Args :
purge_synonyms
Usage : $obj->purge_synonym();
Function: Deletes the list of synonyms to this term.
Returns : A list of scalars.
Args :
Twig management
Each MeSH term belongs to a complex tree like hierarchy of terms where each term can appear multiple times. The immediately surrounding
nodes of the tree are modelled in twigs.
See: Bio::Phenotype::MeSH::Twig.
add_twig
Title : add_twig
Usage : $obj->add_twig( @twigs );
or
$obj->add_twig( $twig );
Function: Pushes one or more twig term names [scalars, most likely Strings]
into the list of twigs.
Returns :
Args : scalar(s).
each_twig
Title : each_twig()
Usage : @gs = $obj->each_twig();
Function: Returns a list of gene symbols [scalars, most likely Strings]
associated with this phenotype.
Returns : A list of scalars.
Args :
purge_twigs
Usage : $obj->purge_twig();
Function: Deletes the list of twigs associated with this term.
Returns : A list of scalars.
Args :
each_parent
Title : each_parent()
Usage : @gs = $obj->each_parent();
Function: Returns a list of names of parents for this term
Returns : A list of scalars.
Args :
perl v5.14.2 2012-03-02 Bio::Phenotype::MeSH::Term(3pm)