Finally I am attaching both BD(first) 1diseasedrug(second) files and output file(see)
Pleas check it
these are just part as the files are big and I also got one error
Code:
bash-3.2$ awk 'NR==FNR{X[$1]=$0;next}{n=split($1,P," ");sub($1,"",$0);for(i=1;i<=n;i++){if(X[P[i]]){print P[i],$0}}}' BD FS=" +" diseasedrugbank >see
awk: (FILENAME=diseasedrugbank FNR=471) fatal: Unmatched ( or \(: /DRD2 ADRA1A Droperidol DHBP DRD2 ADRA1A The exact mechanism of action is unknown, however, droperidol causes a CNS depression at subcortical levels of the brain, midbrain, and brainstem reticular formation. It may antagonize the actions of glutamic acid within the extrapyramidal system. It may also inhibit cathecolamine receptors and the reuptake of neurotransmiters and has strong central antidopaminergic action and weak central anticholinergic action. It can also produce ganglionic blockade and reduced affective response. The main actions seem to stem from its potent Dopamine(2) receptor antagonism with minor antagonistic effects on alpha-1 adrenergic receptors as well. A butyrophenone with general properties similar to those of haloperidol. It is used in conjunction with an opioid analgesic such as fentanyl to maintain the patient in a calm state of neuroleptanalgesia with indifference to surroundings but still able to cooperate with the surgeon. It is also used as a premedicant, as an antiemetic, and for the control of agitation in acute psychoses. (From Martindale, The Extra/
bash-3.2$
Say I have data like shown below. I want all the data that contains XXXX and where it finds XXXX then I also want the Timestamp and the Error fields. I have tried egrep "XXXX|Timestamp" > test.txt. That pulls out the data correctly but gives me two records for each message and it also pulls the... (4 Replies)
I need to find all the files that have group Read or Write permission or files that have user write permission.
This is what I have so far:
find . -exec ls -l {} \; | awk '/-...rw..w./ {print $1 " " $3 " " $4 " " $9}'
It shows me all files where group read = true, group write = true... (5 Replies)
Hi, im have log file ~100000 lines,
192.168.29.1 at 10/08/09 13:58:55
192.168.60.1 at 10/08/09 14:11:28
192.168.58.171 at 10/08/09 14:12:45
192.168.61.12 at 10/08/09 14:15:44
192.168.60.1 at 10/08/09 14:16:36
192.168.60.1 at 10/08/09 14:17:43
192.168.61.12 at 10/08/09 14:18:08... (9 Replies)
Hi all!
I've faced with very unintelligible error using find/grep like this:
root@v29221:~# find /var/www/igor/data/www/lestnitsa.ru | grep u28507I get nothing as a result, but:
root@v29221:~# grep u28507 /var/www/igor/data/www/lestnitsa.ru/_var.inc
$db_name = 'u28507';... (2 Replies)
I need to construct a command that finds directories which contains more than n matches of a certain filename.
E.g. I have many directories at different locations and want to find all directories that has 2 or more .dat-files.
I thought of using find and maybe the exec parameter to issue an... (5 Replies)
Use and complete the template provided. The entire template must be completed. If you don't, your post may be deleted!
1. The problem statement, all variables and given/known data:
I must write a shell script that calls two external Perl functions--one of which sorts the data in a file, and... (6 Replies)
Hi all,
I have 2 files:
second file
I want if entries in one file will match in other file. It shuld wite approve before it
so output shuld be (1 Reply)
I have a .csv file that has been create from a google form and I need to extract the data from it that has been entered by users.
The CSV will have anywhere between 100 and 1000 lines which comprise entr data for a sports carnival
A few typical line is shown here to show the problem I have
... (19 Replies)
Need a script that can find text in a file and replace it accordingly.
This is the file I have:
while IFS=',' read -r f1 f2 f3
do
{
nohup /home/testuser/dbmaintenance/sys_offline_maintenance.sh $f1 $f2 $f3 > $f2.out &
}
done < "/home/testuser/dbmaintenance/week1offlineserver.txt"
In... (4 Replies)
Discussion started by: singhhe
4 Replies
LEARN ABOUT DEBIAN
queue-repair
queue-repair(8) System Manager's Manual queue-repair(8)NAME
queue-repair - deal with the qmail queue directory structure
SYNOPSIS
queue-repair [ -htrcbn ] [ -n split ] [ conf-qmail ]
DESCRIPTION
queue-repair deals with the qmail queue structure; it can create a new queue, move and properly rename a queue, dynamically change the
conf-split value, convert big-todo queues to non-big-todo and vice versa, and repair a corrupted queue.
conf-qmail defaults to /var/lib/qmail/ on Debian.
OPTIONS
-h|--help
Display usage information and built-in defaults, then exit.
-t|--test
Run in test-only mode. queue-repair will attempt to report all problems that it finds, without correcting them. This is the
default.
-r|--repair
Run in repair mode. queue-repair will attempt to correct all problems that it finds, except if the basic queue directories (queue,
queue/mess, queue/info, etc) are not found.
-c|--create
Run in create-and-repair mode. queue-repair will attempt to correct all problems that it finds, including creation of a new queue
structure from scratch.
-s|--split split
Specify split as the value of conf-split. This is the number of split subdirectories for those queue directories which are hashed.
The default for qmail is 23. Appropriate values depend on the volume of mail handled, OS filesystem efficiency, and other factors,
but this should always be a prime number.
If you do not specify conf-split, queue-repair will attempt to determine the current value from the existing queue. This option can
be used, however, to change the conf-split value of an existing queue (qmail will still have to be recompiled with the new value).
When creating a new queue, this option must always be specified.
-b|--bigtoto
Use big-todo. queue-repair should be able to automatically determine if you're using qmail patched with the big-todo patch. This
option can be used, however, to convert a non-big-todo queue to a big-todo queue (qmail will still have to be recompiled with the
big-todo patch).
If neither this option nor --no-bigtodo is used, queue-repair will attempt to determine this automatically. When creating a new
queue, either this option or --no-bigtodo must always be specified.
-n|--no-bigtodo
Do not use big-todo. queue-repair should be able to automatically determine if you're using qmail patched with the big-todo patch.
This option can be used, however, to convert a big-todo queue to a non big-todo queue (qmail will still have to be recompiled with-
out the big-todo patch).
If neither this option nor --bigtodo is used, queue-repair will attempt to determine this automatically. When creating a new queue,
either this option or --bigtodo must always be specified.
--i-want-a-broken-conf-split
Force the use of a non-prime value for conf-split.
SEE ALSO qmail(7)queue-repair(8)