Sponsored Content
Top Forums Shell Programming and Scripting Print unique records in 2 columns using awk Post 302726309 by ctsgnb on Sunday 4th of November 2012 05:23:49 AM
Old 11-04-2012
Quote:
Originally Posted by Scrutinizer
Not exactly, my code does not assume that the first value in the second columns is 1. It finds values in the first field that only have (a) line(s) with the value 1.
I guess it depends on what the OP means with "only 1 value" . Does he mean "only one value" or "only value 1"
Hi Scruti

I 100% agree with you : "only one value" or "only value 1" is not the same, that's why i pointed out the difference between our codes, eventhough i admit, maybe i explained it in a clumsy way Smilie

Last edited by ctsgnb; 11-04-2012 at 06:32 AM..
 

10 More Discussions You Might Find Interesting

1. UNIX for Dummies Questions & Answers

AWK ??-print for fields within records in a file

Hello all, Would appreciate if someone can help me out on the following requirement. INPUT FILE: -------------------------- TPS REPORT abc def ghi jkl mon pqr stu vrs lll END OF TPS REPORT TPS REPORT field1 field2 field3 field4 field5 field6 (8 Replies)
Discussion started by: hyennah
8 Replies

2. Shell Programming and Scripting

awk : extracting unique lines based on columns

Hi, snp.txt CHR_A SNP_A BP_A_st BP_A_End CHR_B BP_B SNP_B R2 p-SNP_A p-SNP_B 5 rs1988728 74904317 74904318 5 74960646 rs1427924 0.377333 0.000740085 0.013930081 5 ... (12 Replies)
Discussion started by: genehunter
12 Replies

3. Shell Programming and Scripting

awk print only select records from file2

Print only records from file 2 that do not match file 1 based on criteria of comparing column 1 and column 6 Was trying to play around with following code I found on other threads but not too successful Code: awk 'NR==FNR{p=$1;$1=x;A=$0;next}{$2=$2(A?A:",,,")}1' FS=~ OFS=~ file1 FS="*"... (11 Replies)
Discussion started by: sigh2010
11 Replies

4. Shell Programming and Scripting

count the unique records based on certain columns

Hi everyone, I have a file result.txt with records as following and another file mirna.txt with a list of miRNAs e.g. miR22, miR123, miR13 etc. Gene Transcript miRNA Gar Nm_111233 miR22 Gar Nm_123440 miR22 Gar Nm_129939 miR22 Hel Nm_233900 miR13 Hel ... (6 Replies)
Discussion started by: miclow
6 Replies

5. Shell Programming and Scripting

Print unique names in each row of a specific column using awk

Is it possible to remove redundant names in the 4th column? input cqWE 100 200 singapore;singapore AZO 300 400 brazil;america;germany;ireland;germany .... .... output cqWE 100 200 singapore AZO 300 400 brazil;america;germany;ireland (4 Replies)
Discussion started by: quincyjones
4 Replies

6. Shell Programming and Scripting

Print unique names in a specific column using awk

Is it possible to modify file like this. 1. Remove all the duplicate names in a define column i.e 4th col 2. Count the no.of unique names separated by ";" and print as a 5th col thanx in advance!! Q input c1 30 3 Eh2 c10 96 3 Frp c41 396 3 Ua5;Lop;Kol;Kol c62 2 30 Fmp;Fmp;Fmp ... (5 Replies)
Discussion started by: quincyjones
5 Replies

7. Shell Programming and Scripting

Compare columns of multiple files and print those unique string from File1 in an output file.

Hi, I have multiple files that each contain one column of strings: File1: 123abc 456def 789ghi File2: 123abc 456def 891jkl File3: 234mno 123abc 456def In total I have 25 of these type of file. (5 Replies)
Discussion started by: owwow14
5 Replies

8. Shell Programming and Scripting

awk to print unique text in field

I am trying to use awk to print the unique entries in $2 So in the example below there are 3 lines but 2 of the lines match in $2 so only one is used in the output. File.txt chr17:29667512-29667673 NF1:exon.1;NF1:exon.2;NF1:exon.38;NF1:exon.4;NF1:exon.46;NF1:exon.47 703.807... (5 Replies)
Discussion started by: cmccabe
5 Replies

9. Shell Programming and Scripting

awk to print unique text in field before hyphen

Trying to print the unique values in $2 before the -, currently the count is displayed. Hopefully, the below is close. Thank you :). file chr2:46603668-46603902 EPAS1-902|gc=54.3 253.1 chr2:211471445-211471675 CPS1-1205|gc=48.3 264.7 chr19:15291762-15291983 NOTCH3-1003|gc=68.8 195.8... (3 Replies)
Discussion started by: cmccabe
3 Replies

10. Shell Programming and Scripting

Issue using awk to print min values for unique ids

I am using the following script to search for and print minimum values for each individual Fields (3-14) for each unique id (Field 1). But when the field contains a "-99.99" ( I am ignoring "-99.99") and when the minimum value is the first line of a new id (Field 1), the output does not print Field... (13 Replies)
Discussion started by: ncwxpanther
13 Replies
SHELL-QUOTE(1)						User Contributed Perl Documentation					    SHELL-QUOTE(1)

NAME
shell-quote - quote arguments for safe use, unmodified in a shell command SYNOPSIS
shell-quote [switch]... arg... DESCRIPTION
shell-quote lets you pass arbitrary strings through the shell so that they won't be changed by the shell. This lets you process commands or files with embedded white space or shell globbing characters safely. Here are a few examples. EXAMPLES
ssh preserving args When running a remote command with ssh, ssh doesn't preserve the separate arguments it receives. It just joins them with spaces and passes them to "$SHELL -c". This doesn't work as intended: ssh host touch 'hi there' # fails It creates 2 files, hi and there. Instead, do this: cmd=`shell-quote touch 'hi there'` ssh host "$cmd" This gives you just 1 file, hi there. process find output It's not ordinarily possible to process an arbitrary list of files output by find with a shell script. Anything you put in $IFS to split up the output could legitimately be in a file's name. Here's how you can do it using shell-quote: eval set -- `find -type f -print0 | xargs -0 shell-quote --` debug shell scripts shell-quote is better than echo for debugging shell scripts. debug() { [ -z "$debug" ] || shell-quote "debug:" "$@" } With echo you can't tell the difference between "debug 'foo bar'" and "debug foo bar", but with shell-quote you can. save a command for later shell-quote can be used to build up a shell command to run later. Say you want the user to be able to give you switches for a command you're going to run. If you don't want the switches to be re-evaluated by the shell (which is usually a good idea, else there are things the user can't pass through), you can do something like this: user_switches= while [ $# != 0 ] do case x$1 in x--pass-through) [ $# -gt 1 ] || die "need an argument for $1" user_switches="$user_switches "`shell-quote -- "$2"` shift;; # process other switches esac shift done # later eval "shell-quote some-command $user_switches my args" OPTIONS
--debug Turn debugging on. --help Show the usage message and die. --version Show the version number and exit. AVAILABILITY
The code is licensed under the GNU GPL. Check http://www.argon.org/~roderick/ or CPAN for updated versions. AUTHOR
Roderick Schertler <roderick@argon.org> perl v5.16.3 2010-06-11 SHELL-QUOTE(1)
All times are GMT -4. The time now is 06:28 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy