Hello all,
Would appreciate if someone can help me out on the following requirement.
INPUT FILE:
--------------------------
TPS REPORT
abc def ghi
jkl mon pqr
stu vrs lll
END OF TPS REPORT
TPS REPORT
field1 field2 field3
field4 field5 field6 (8 Replies)
Print only records from file 2 that do not match file 1 based on criteria of comparing column 1 and column 6
Was trying to play around with following code I found on other threads but not too successful
Code:
awk 'NR==FNR{p=$1;$1=x;A=$0;next}{$2=$2(A?A:",,,")}1' FS=~ OFS=~ file1 FS="*"... (11 Replies)
Hi everyone,
I have a file result.txt with records as following and another file mirna.txt with a list of miRNAs e.g. miR22, miR123, miR13 etc.
Gene Transcript miRNA
Gar Nm_111233 miR22
Gar Nm_123440 miR22
Gar Nm_129939 miR22
Hel Nm_233900 miR13
Hel ... (6 Replies)
Is it possible to modify file like this.
1. Remove all the duplicate names in a define column i.e 4th col
2. Count the no.of unique names separated by ";" and print as a 5th col
thanx in advance!!
Q
input
c1 30 3 Eh2
c10 96 3 Frp
c41 396 3 Ua5;Lop;Kol;Kol
c62 2 30 Fmp;Fmp;Fmp
... (5 Replies)
Hi,
I have multiple files that each contain one column of strings:
File1:
123abc
456def
789ghi
File2:
123abc
456def
891jkl
File3:
234mno
123abc
456def
In total I have 25 of these type of file. (5 Replies)
I am trying to use awk to print the unique entries in $2
So in the example below there are 3 lines but 2 of the lines match in $2 so only one is used in the output.
File.txt
chr17:29667512-29667673 NF1:exon.1;NF1:exon.2;NF1:exon.38;NF1:exon.4;NF1:exon.46;NF1:exon.47 703.807... (5 Replies)
Trying to print the unique values in $2 before the -, currently the count is displayed. Hopefully, the below is close. Thank you :).
file
chr2:46603668-46603902 EPAS1-902|gc=54.3 253.1
chr2:211471445-211471675 CPS1-1205|gc=48.3 264.7
chr19:15291762-15291983 NOTCH3-1003|gc=68.8 195.8... (3 Replies)
I am using the following script to search for and print minimum values for each individual Fields (3-14) for each unique id (Field 1). But when the field contains a "-99.99" ( I am ignoring "-99.99") and when the minimum value is the first line of a new id (Field 1), the output does not print Field... (13 Replies)
Discussion started by: ncwxpanther
13 Replies
LEARN ABOUT DEBIAN
colorgccrc
COLORGCCRC(5) File Formats Manual COLORGCCRC(5)NAME
colorgccrc - configuration file for colorgcc
DESCRIPTION
A colorgccrc configuration file is used to configure the highlighting of the compiler output from colorgcc.
SYNTAX
Each line consists of a keyword designating a configuration variable. The keyword is followed by `:' and then one or several values
(depending on the keyword). Lines beginning with a hash mark `#' are comments.
CONFIGURATION VARIABLES
g++ | gcc | c++ | cc | g77 | gcj | gnat | gpc
Specifies the paths to the compilers. Takes one value; a path to the compiler.
nocolor
Specifies what terminal types colorization should be disabled on. Takes one or several values, separated by whitespace.
srcColor
Specifies the highlighting attributes source-code should be given. Takes one or several color attributes. See the section COLOR
ATTRIBUTES for more information.
introColor
Specifies the highlighting attributes for normal compiler output. Takes one or several color attributes. See the section COLOR
ATTRIBUTES for more information.
warningFileNameColor | errorFileNameColor
Specifies the highlighting attributes for the filename in a warning or an error, respectively. Takes one or several color
attributes. See the section COLOR ATTRIBUTES for more information.
warningNumberColor | errorNumberColor
Specifies the highlighting attributes for the line-number in a warning or an error, respectively. Takes one or several color
attributes. See the section COLOR ATTRIBUTES for more information.
warningMessageColor | errorMessageColor
Specifies the highlighting attributes for the message-text in a warning or an error, respectively. Takes one or several color
attributes. See the section COLOR ATTRIBUTES for more information.
COLOR ATTRIBUTES
The following attributes are valid for highlighting.
clear, reset
bold, underline, underscore, blink, reverse, concealed
black, red, green, yellow, blue, magenta, cyan, white
on_black, on_red, on_green, on_yellow, on_blue, on_magenta, on_cyan, on_white
SEE ALSO gcc(1), colorgcc(1)HISTORY
Jan 15 2003: Initial version of this manual-page.
REPORTING BUGS
Report bugs to <jmoyers@geeks.com>
AUTHORS
Jamie Moyers <jmoyers@geeks.com> is the author of colorgcc.
This manual page was written by Joe Wreschnig <piman@sacredchao.net>, and modified by David Weinehall <tao@debian.org>, for the Debian
GNU/Linux system (but may be used by others).
COPYRIGHT
Copyright (C) 2003 Jamie Moyers
This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICU-
LAR PURPOSE.
Jan 15, 2003 COLORGCCRC(5)