1. Shell Programming and Scripting

I am trying to write an awk program to reformat a data table and convert the date to julian time. I have all the individual steps working, but I am having some issues joing them into one program. Can anyone help me out? Here is my code so far: # This is an awk program to convert the dates from... (4 Replies)

2. Shell Programming and Scripting

I am new to Perl. I need to reformat a data file as the last part of a script I am working on. I am stuck on this. Here is the current format: CUSTOMER Filename 09/04/07-08:49 CUSTOMER Filename 09/04/07-08:52 CUSTOMER Filename 09/04/07-08:52 CUSTOMER2 Filename 09/04/07-08:49 CUSTOMER2... (3 Replies)

3. Shell Programming and Scripting

Can anyone help me with a shell script that can do the following: I have a data in fasta format (first line is the header, followed by a sequence of characters). >ALLLY GGCCCCTCGAGCCTCGAACCGGAACCTCCAAATCCGAGACGCTCTGCTTATGAGGACCTC GAAATATGCCGGCCAGTGAAAAAATCTTGTGGCTTTGAGGGCTTTTGGTTGGCCAGGGGC... (5 Replies)

4. Shell Programming and Scripting

I have a file which have data like A.txt a 1Jan I am in a1. 1Jan I was born. 2Jan I am here. 3Jan I am in a3. b 1Jan I am in b1. c 2Jan I am in c2. d 2Jan I am in d2. 5jan I am in d5. date in the file might be vary evertime. (9 Replies)

5. Shell Programming and Scripting

Hi, I am writing just to share my appreciation for help I have received from this site in the past. In a previous post Split File by Data Group I received a lot of help with a troublesome awk script to reformat some complicated data blocks. What I learned really came in hand recently when I... (1 Reply)

6. Shell Programming and Scripting

input file: hsa-miR-4726-5p Score hsa-miR-483-5p Score hsa-miR-125b-2* Score hsa-miR-4492 hsa-miR-4508 hsa-miR-4486 Score Desired output file: hsa-miR-4726-5p Score hsa-miR-483-5p Score hsa-miR-125b-2* Score hsa-miR-4492 hsa-miR-4508 hsa-miR-4486 Score ... (6 Replies)

7. Shell Programming and Scripting

Input file: 58227131 50087390 57339526 40578034 65348841 55614853 64363217 44178559 Desired output file: 58227131 50087390 57339526 40578034 65348841 55614853 64363217 44178559 Command that I try: (4 Replies)

8. Shell Programming and Scripting

I am helping my wife set up a real estate site and I am starting to integrate MLS listings. We are using a HostGator level 5 VPS running CentOS and have full root and SSH access to the VPS. Thus far I have automated the daily FTP download of listings from our MLS server using a little sh script.... (4 Replies)

9. Shell Programming and Scripting

Input file: dependent general_process dependent general_process regulation general_process - - template component food component binding data_rearrangement binding data_rearrangement specific_activity data_rearrangement - ... (7 Replies)

10. Shell Programming and Scripting

Input file: bv|111259484|pir||T49736_real_data bv|159484|pir||T9736_data_figure bv|113584|prf|T4736|truth bv|113584|pir||T4736_truth Desired output: bv|111259484|pir|T49736|real_data bv|159484|pir|T9736|data_figure bv|113584|prf|T4736|truth bv|113584|pir|T4736|truth Once the... (8 Replies)