Sponsored Content
Top Forums Shell Programming and Scripting Sorting file based on a numeric column Post 302719859 by Homa on Tuesday 23rd of October 2012 09:43:23 AM
Old 10-23-2012
Sorting file based on a numeric column

Hi,

I use UBUNTU 12.04.

I have a file with this structure:
Code:
Name 2 1245787 A G 12 14 12 14 ....
Name 1 1245789 C T 13 12 12 12.....

I would like to sort my file based on the second column so to have this output for example:
Code:
Name 1 1245789 C T 13 12 12 12.....
Name 2 1245787 A G 12 14 12 14 ....

The second column goes from 1 to 22. I used sort -k2,2 file name but it doesn't sort my numbers in the second column but it gives 1 then 10, then 11 to 19, then 2 to 22.

How I should sort this, I imagine having numeric values in my second column is the problem.

Thank you very much.

Moderator's Comments:
Mod Comment Please use code tags next time for your code and data.

Last edited by radoulov; 10-23-2012 at 10:57 AM..
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

sorting csv file based on column selected

Hi all, in my csv file it'll look like this, and of course it may have more columns US to UK;abc-hq-jcl;multimedia UK to CN;def-ny-jkl;standard DE to DM;abc-ab-klm;critical FD to YM;la-yr-tym;standard HY to MC;la-yr-ytm;multimedia GT to KJ;def-ny-jrt;critical I would like to group... (4 Replies)
Discussion started by: tententen
4 Replies

2. Shell Programming and Scripting

How to check if a column is having a numeric value or not in a file?

Hi, I want to know, how we find out if a column is having a numeric value or not. For Example if we have a csv file as ASDF,QWER,GHJK,123,FGHY,9876 GHTY,NVHR,WOPI,623,HFBS,5386 we need to find out if the 4th and 6th column has muneric value or not. Thanks in advance Keerthan (9 Replies)
Discussion started by: keerthan
9 Replies

3. Shell Programming and Scripting

sorting numeric array

Hi, I would like to do the following sorting, but the output is not what i expected. Why 222 and 2222 are not at the last two elements of array? awk 'BEGIN{a="22";a="2222";a="33";a="44";a="222";a="11";a="22";a="33";asort(a); for (i=1;i<=8;i++) print a}' 11 22 22 222 2222 33 33 44... (1 Reply)
Discussion started by: phoeberunner
1 Replies

4. Shell Programming and Scripting

sorting based on a specified column in a text file

I have a tab delimited file with 5 columns 79 A B 20.2340 6.1488 8.5086 1.3838 87 A B 0.1310 0.0382 0.0054 0.1413 88 A B 46.1651 99.0000 21.8107 0.2203 89 A B 0.1400 0.1132 0.0151 0.1334 114 A B 0.1088 0.0522 0.0057 0.1083 115 A B... (2 Replies)
Discussion started by: Lucky Ali
2 Replies

5. Shell Programming and Scripting

[SOLVED] Sorting into new files based on column

Hi, I have the following file, I need to sort it based on a column and write to different output files based on this column request_guid iso_country_cd address_data response_time 32895901-d17f-414c-ac93-3e7e0f5ec240 AND BaseName:CATALUNYA; HouseNumber:1; ISOCountryCode:AND;... (1 Reply)
Discussion started by: ramky79
1 Replies

6. UNIX for Dummies Questions & Answers

Sorting a file based on the absolute value of a column

I would like to sort a tab delimited text file based on the absolute value of its second column. How do I go about doing that? Thanks! Example input: A -12 B 0 C -6 D 7 Output: A -12 D 7 C -6 B 0 (4 Replies)
Discussion started by: evelibertine
4 Replies

7. Shell Programming and Scripting

Sorting file based on name

Hi team, We have few files landing to our server based on sequence number. These files have to be processed in the sequence number order. Once the sequence number has reached its maximum, the files with sequence number 0000 has to be processed. For example: IN9997 IN9998 IN9999 IN0000... (7 Replies)
Discussion started by: anijan
7 Replies

8. Shell Programming and Scripting

[Solved] Sorting a column in a file based on a column in a second file

Hello, I have two files as the following: File1: F0100020 A G F0100030 A T F0100040 A G File2: F0100040 A G BTA-28763-no-rs 77.2692 F0100030 A T BTA-29334-no-rs 11.4989 F0100020 A G BTA-29515-no-rs 127.006 I want to sort the second file based on the... (6 Replies)
Discussion started by: Homa
6 Replies

9. Shell Programming and Scripting

[Solved] Sorting a column based on another column

hello, I have a file as follows: F0100010 A C F0100040 A G BTA-28763-no-rs 77.2692 F0100020 A G F0100030 A T BTA-29334-no-rs 11.4989 F0100030 A T F0100020 A G BTA-29515-no-rs 127.006 F0100040 A G F0100010 A C BTA-29644-no-rs 7.29827 F0100050 A... (9 Replies)
Discussion started by: Homa
9 Replies

10. Shell Programming and Scripting

Sorting based on File name

Hi All I have a requirement to list all the files in chronological order based on the date value in the file name.For ex if I have three files as given below ABC_TEST_20160103_1012.txt ABC_TEST_20160229_1112.txt ABC_TEST_20160229_1112.txt I have written code as given below to list out... (2 Replies)
Discussion started by: ginrkf
2 Replies
Tree::Simple::Visitor::Sort(3pm)			User Contributed Perl Documentation			  Tree::Simple::Visitor::Sort(3pm)

NAME
Tree::Simple::Visitor::Sort - A Visitor for sorting a Tree::Simple object heirarchy SYNOPSIS
use Tree::Simple::Visitor::Sort; # create a visitor object my $visitor = Tree::Simple::Visitor::Sort->new(); $tree->accept($visitor); # the tree is now sorted ascii-betically # set the sort function to # use a numeric comparison $visitor->setSortFunction($visitor->NUMERIC); $tree->accept($visitor); # the tree is now sorted numerically # set a custom sort function $visitor->setSortFunction(sub { my ($left, $right) = @_; lc($left->getNodeValue()->{name}) cmp lc($right->getNodeValue()->{name}); }); $tree->accept($visitor); # the tree's node are now sorted appropriately DESCRIPTION
This implements a recursive multi-level sort of a Tree::Simple heirarchy. I think this deserves some more explaination, and the best way to do that is visually. Given the tree: 1 1.3 1.2 1.2.2 1.2.1 1.1 4 4.1 2 2.1 3 3.3 3.2 3.1 A normal sort would produce the following tree: 1 1.1 1.2 1.2.1 1.2.2 1.3 2 2.1 3 3.1 3.2 3.3 4 4.1 A sort using the built-in REVERSE sort function would produce the following tree: 4 4.1 3 3.3 3.2 3.1 2 2.1 1 1.3 1.2 1.2.2 1.2.1 1.1 As you can see, no node is moved up or down from it's current depth, but sorted with it's siblings. Flexible customized sorting is possible within this framework, however, this cannot be used for tree-balancing or anything as complex as that. METHODS
new There are no arguments to the constructor the object will be in its default state. You can use the "setNodeFilter" and "setSortFunction" methods to customize its behavior. includeTrunk ($boolean) Based upon the value of $boolean, this will tell the visitor to include the trunk of the tree in the sort as well. setNodeFilter ($filter_function) This method accepts a CODE reference as it's $filter_function argument and throws an exception if it is not a code reference. This code reference is used to filter the tree nodes as they are sorted. This can be used to gather specific information from a more complex tree node. The filter function should accept a single argument, which is the current Tree::Simple object. setSortFunction ($sort_function) This method accepts a CODE reference as it's $sort_function argument and throws an exception if it is not a code reference. The $sort_function is used by perl's builtin "sort" routine to sort each level of the tree. The $sort_function is passed two Tree::Simple objects, and must return 1 (greater than), 0 (equal to) or -1 (less than). The sort function will override and bypass any node filters which have been applied (see "setNodeFilter" method above), they cannot be used together. Several pre-built sort functions are provided. All of these functions assume that calling "getNodeValue" on the Tree::Simple object will return a suitable sortable value. REVERSE This is the reverse of the normal sort using "cmp". NUMERIC This uses the numeric comparison operator "<=>" to sort. REVERSE_NUMERIC The reverse of the above. ALPHABETICAL This lowercases the node value before using "cmp" to sort. This results in a true alphabetical sorting. REVERSE_ALPHABETICAL The reverse of the above. If you need to implement one of these sorting routines, but need special handling of your Tree::Simple objects (such as would be done with a node filter), I suggest you read the source code and copy and modify your own sort routine. If it is requested enough I will provide this feature in future versions, but for now I am not sure there is a large need. visit ($tree) This is the method that is used by Tree::Simple's "accept" method. It can also be used on its own, it requires the $tree argument to be a Tree::Simple object (or derived from a Tree::Simple object), and will throw and exception otherwise. It should be noted that this is a destructive action, since the sort happens in place and does not produce a copy of the tree. BUGS
None that I am aware of. Of course, if you find a bug, let me know, and I will be sure to fix it. CODE COVERAGE
See the CODE COVERAGE section in Tree::Simple::VisitorFactory for more inforamtion. SEE ALSO
These Visitor classes are all subclasses of Tree::Simple::Visitor, which can be found in the Tree::Simple module, you should refer to that module for more information. ACKNOWLEDGEMENTS
Thanks to Vitor Mori for the idea and much of the code for this Visitor. AUTHORS
Vitor Mori, <vvvv767@hotmail.com> stevan little, <stevan@iinteractive.com> COPYRIGHT AND LICENSE
Copyright 2004, 2005 by Vitor Mori & Infinity Interactive, Inc. <http://www.iinteractive.com> This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. perl v5.10.1 2005-07-14 Tree::Simple::Visitor::Sort(3pm)
All times are GMT -4. The time now is 01:07 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy