|
|
Sponsored Content
Top Forums
Shell Programming and Scripting
Change line into fixed columns
Post 302712961 by RudiC on Wednesday 10th of October 2012 05:26:20 AM
10-10-2012
|
|
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi, I have two files.
File1:
File1 contains two fixed width columns ID of 15 characters length and Name is of 100 characters length.
ID Name
1-43<<11 spaces>>Swapna<<94 spaces>>
1-234<<10 spaces>>Mani<<96 spaces>>
1-3456<<9 spaces>>Kapil<<95 spaces>>
File2:
... (4 Replies)
Discussion started by: manneni prakash
4 Replies
2. Shell Programming and Scripting
Hi everyone,
I have been working on a pretty laborious shellscript (with bash) the last couple weeks that parses my firewall policies (from a Juniper) for me and creates a nifty little columned output. It does so using awk on a line by line basis to pull out the appropriate pieces of each... (4 Replies)
Discussion started by: cixelsyd
4 Replies
3. Shell Programming and Scripting
I was trying to use the AIX 6.1 sort command to sort fixed-length data records, sorting by specific columns only. It took some time to figure out how to get it to work, so I wanted to share the solution. The sort man page wasn't much help, because it talks about field delimeters (default space... (1 Reply)
Discussion started by: CheeseHead1
1 Replies
4. Shell Programming and Scripting
Hi,
I have a huge file with a single line.
But I want to break that line into lines of with each line having five columns.
My file is like this:
code:
"hi","there","how","are","you?","It","was","great","working","with","you.","hope","to","work","you."
I want it like this:
code:... (1 Reply)
Discussion started by: rajsharma
1 Replies
5. UNIX for Dummies Questions & Answers
Hi,
I have a file with fixed number of columns (total 58 columns) delimeted by pipe (|). Due to a bug in the application the export file does not come with fixed number of columns. The missing data columns are being replaced by blank in the output file. In one line I can have 25 columns (33... (1 Reply)
Discussion started by: yale_work
1 Replies
6. Shell Programming and Scripting
Hi,
I am in a situation to print the message on a column, where the each line starting position should be same.
For example code:
HOSTNAME1="1.2.3.4.5.6.7"
TARGET_DIR="/tmp"
echo "HOSTNAME1:" "$HOSTNAME1" | awk -v var="Everyone" '{len=55-length;printf("%s%*s\n",$0,len,var)}'
echo... (4 Replies)
Discussion started by: tprabhaker
4 Replies
7. Shell Programming and Scripting
I am trying to selectively display several columns from a db2 query, which gives me a fixed-width output (partial output listed here):
--------- -------------------------- ------------ ------
000 0000000000198012 702 29
000 0000000000198013 ... (9 Replies)
Discussion started by: ahsh79
9 Replies
8. Shell Programming and Scripting
Hi All ,
I have a requirement where I need to remove duplicates from a fixed width file which has multiple key columns .Also , need to capture the duplicate records into another file .
File has 8 columns.
Key columns are col1 and col2.
Col1 has the length of 8 col 2 has the length of 3.
... (5 Replies)
Discussion started by: saj
5 Replies
9. UNIX for Dummies Questions & Answers
How do I extract values in a few columns in a row of a fixed length file?
If there are 8 columns and I need to extract values of 2nd,4th and 6 th columns, how do i do that? I used cut command, this I used only for one column. How do I do it more than one column?
The below command will give... (1 Reply)
Discussion started by: princetd001
1 Replies
10. Shell Programming and Scripting
Hello All,
I have a requirement in which i will be given a sql query as input in a file with dynamic number of columns. For example some times i will get 5 columns, some times 8 columns etc up to 20 columns.
So my requirement is to generate a output query which will have 20 columns all the... (7 Replies)
Discussion started by: vikas_trl
7 Replies
LEARN ABOUT DEBIAN
fastx_quality_stats
FASTX_QUALITY_STATS(1) User Commands FASTX_QUALITY_STATS(1) NAME
fastx_quality_stats - FASTX Statistics DESCRIPTION
usage: fastx_quality_stats [-h] [-N] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit 0.0.13.2 by A. Gordon (gordon@cshl.edu) [-h] = This helpful help screen. [-i INFILE] = FASTQ input file. default is STDIN. [-o OUTFILE] = TEXT output file. default is STDOUT. [-N] = New output format (with more information per nucleotide/cycle). The *OLD* output TEXT file will have the following fields (one row per column): column = column number (1 to 36 for a 36-cycles read solexa file) count = number of bases found in this column. min = Lowest quality score value found in this column. max = Highest quality score value found in this column. sum = Sum of quality score values for this column. mean = Mean quality score value for this column. Q1 = 1st quartile quality score. med = Median quality score. Q3 = 3rd quartile quality score. IQR = Inter-Quartile range (Q3-Q1). lW = 'Left-Whisker' value (for boxplotting). rW = 'Right-Whisker' value (for boxplotting). A_Count = Count of 'A' nucleotides found in this column. C_Count = Count of 'C' nucleotides found in this column. G_Count = Count of 'G' nucleotides found in this column. T_Count = Count of 'T' nucleotides found in this column. N_Count = Count of 'N' nucleo- tides found in this column. max-count = max. number of bases (in all cycles) The *NEW* output format: cycle (previously called 'column') = cycle number max-count For each nucleotide in the cycle (ALL/A/C/G/T/N): count = number of bases found in this column. min = Lowest quality score value found in this column. max = Highest quality score value found in this column. sum = Sum of quality score values for this column. mean = Mean quality score value for this column. Q1 = 1st quartile quality score. med = Median quality score. Q3 = 3rd quartile quality score. IQR = Inter-Quartile range (Q3-Q1). lW = 'Left-Whisker' value (for boxplotting). rW = 'Right-Whisker' value (for boxplotting). SEE ALSO
The quality of this automatically generated manpage might be insufficient. It is suggested to visit http://hannonlab.cshl.edu/fastx_toolkit/commandline.html to get a better layout as well as an overview about connected FASTX tools. fastx_quality_stats 0.0.13.2 May 2012 FASTX_QUALITY_STATS(1)