First, thanks for the help in previous posts... couldn't have gotten where I am now without it!
So here is what I have, I use AWK to match $1 and $2 as 1 string in file1 to $1 and $2 as 1 string in file2. Now I'm wondering if I can extend this AWK command to incorporate the following:
If $1... (4 Replies)
Hi,
I appreciate all who have been very helpful to me in providing valuable suggestions and replies.
I want to write a script to look up a file and match the contents. Let me go through the scenario. Lets say i have two files
Content file:
abc, bcd, adh|bcdf|adh|wed
bcf, cdf,... (2 Replies)
Hi Friends,
I'm a great fan of this forum... it has helped me tone my skills in shell scripting. I have a challenge here, which I'm sure you guys would help me in achieving...
File A has a list of job ids and I need to compare this with the File B (*.log) and File C (extend *.log) and copy... (6 Replies)
Hi All,
I don't know how to fast do this field replace that need lookup from another file to form the update result:confused:
I want to do it by general shell script
Can anyone help to solve it ? Thanks for your kindly reply in advance.
CK (0 Replies)
Hi,
I have two questions which I would massively appreciate help with.
1.
I am trying to insert a field into a file similar to the vlookup function in excel. In column 2 is a gene id for which i would like to insert the full name in the adjacent column. I have a map file (map.file) which... (1 Reply)
not getting anywhere with this
an xml file contains multiple clients set up with same tags, different values.
I need to parse the file for client foo, and change the value of tag "64bit" from false to true.
cat clients.xml
<Client type"FIX">
<ClientName>foo</ClientName>... (3 Replies)
If $1 in file1 matches $2 in file2. Then the value in $2 of file2 is updated to $1"."$2 of file2. The awk seems to only match the two files but not update. Thank you :).
awk
awk 'NR==FNR{A ; next} $1 in A { $2 = a }1' file1 file2
file1
name version
NM_000593 5
NM_001257406... (3 Replies)
The below awk uses $3 and $4 in search as the min and max, then takes each $2 value in lookup and compares it. If the value in lookupfalls within the range in searchthen it prints the entire line in lookup/ICODE]. What I can't seem to figure out is how to print the matching $5 from search on that... (4 Replies)
I am trying to use awk to match two files that are tab-delimited. When a match is found between file1 $1 and file2 $4, $4 in file2 is updated using the $2 value in file1. If no match is found then the next line is processed. Thank you :).
file1
uc001bwr.3 ADC
uc001bws.3 ADC... (4 Replies)
I cannot seem to get what should be a simple awk one-liner to work correctly and cannot figure out why. I would like to use patterns from a specific field in one file as regex to search for matching strings in the entire line ($0) of another file.
I would like to output the lines of File2 which... (1 Reply)
Discussion started by: jvoot
1 Replies
LEARN ABOUT FREEBSD
join
JOIN(1) BSD General Commands Manual JOIN(1)NAME
join -- relational database operator
SYNOPSIS
join [-a file_number | -v file_number] [-e string] [-o list] [-t char] [-1 field] [-2 field] file1 file2
DESCRIPTION
The join utility performs an ``equality join'' on the specified files and writes the result to the standard output. The ``join field'' is
the field in each file by which the files are compared. The first field in each line is used by default. There is one line in the output
for each pair of lines in file1 and file2 which have identical join fields. Each output line consists of the join field, the remaining
fields from file1 and then the remaining fields from file2.
The default field separators are tab and space characters. In this case, multiple tabs and spaces count as a single field separator, and
leading tabs and spaces are ignored. The default output field separator is a single space character.
Many of the options use file and field numbers. Both file numbers and field numbers are 1 based, i.e., the first file on the command line is
file number 1 and the first field is field number 1. The following options are available:
-a file_number
In addition to the default output, produce a line for each unpairable line in file file_number.
-e string
Replace empty output fields with string.
-o list
The -o option specifies the fields that will be output from each file for each line with matching join fields. Each element of list
has either the form file_number.field, where file_number is a file number and field is a field number, or the form '0' (zero), repre-
senting the join field. The elements of list must be either comma (',') or whitespace separated. (The latter requires quoting to
protect it from the shell, or, a simpler approach is to use multiple -o options.)
-t char
Use character char as a field delimiter for both input and output. Every occurrence of char in a line is significant.
-v file_number
Do not display the default output, but display a line for each unpairable line in file file_number. The options -v 1 and -v 2 may be
specified at the same time.
-1 field
Join on the field'th field of file1.
-2 field
Join on the field'th field of file2.
When the default field delimiter characters are used, the files to be joined should be ordered in the collating sequence of sort(1), using
the -b option, on the fields on which they are to be joined, otherwise join may not report all field matches. When the field delimiter char-
acters are specified by the -t option, the collating sequence should be the same as sort(1) without the -b option.
If one of the arguments file1 or file2 is '-', the standard input is used.
EXIT STATUS
The join utility exits 0 on success, and >0 if an error occurs.
COMPATIBILITY
For compatibility with historic versions of join, the following options are available:
-a In addition to the default output, produce a line for each unpairable line in both file1 and file2.
-j1 field
Join on the field'th field of file1.
-j2 field
Join on the field'th field of file2.
-j field
Join on the field'th field of both file1 and file2.
-o list ...
Historical implementations of join permitted multiple arguments to the -o option. These arguments were of the form
file_number.field_number as described for the current -o option. This has obvious difficulties in the presence of files named 1.2.
These options are available only so historic shell scripts do not require modification and should not be used.
SEE ALSO awk(1), comm(1), paste(1), sort(1), uniq(1)STANDARDS
The join command conforms to IEEE Std 1003.1-2001 (``POSIX.1'').
BSD July 5, 2004 BSD