Sponsored Content
Top Forums Shell Programming and Scripting reading information from a table and apply a command on multiple files Post 302708879 by vidyadhar85 on Tuesday 2nd of October 2012 10:48:18 AM
Old 10-02-2012
to make it easy and quick loop through while or for loop in that directory and mv the files with the below command...

Code:
 
echo "gi|16799079|ref|NC_003212.1|:2769071-2769101.txt"|sed -e 's/[:|]/_/g'


Last edited by vidyadhar85; 10-02-2012 at 11:56 AM..
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Apply `chmod` for multiple files through FTP

Hi all, Can you please help me in this aspect. I devoloped a FTP script to copy a directory to remote server. Now i got stuck-up in changing the file permissions for all the files in directory. I tried to change the permissions of single file and I did it but failed in changing... (3 Replies)
Discussion started by: Chanakya.m
3 Replies

2. Shell Programming and Scripting

How to Pull out multiple files from DB table and redirect all those files to a differetn directory?

Hi everyone!! I have a database table, which has file_name as one of its fields. Example: File_ID File_Name Directory Size 0001 UNO_1232 /apps/opt 234 0002 UNO_1234 /apps/opt 788 0003 UNO_1235 /apps/opt 897 0004 UNO_1236 /apps/opt 568 I have to... (3 Replies)
Discussion started by: ss3944
3 Replies

3. Shell Programming and Scripting

Apply 'awk' to all files in a directory or individual files from a command line

Hi All, I am using the awk command to replace ',' by '\t' (tabs) in a csv file. I would like to apply this to all .csv files in a directory and create .txt files with the tabs. How would I do this in a script? I have the following script called "csvtabs": awk 'BEGIN { FS... (4 Replies)
Discussion started by: ScKaSx
4 Replies

4. Shell Programming and Scripting

apply record separator to multiple files within a directory using awk

Hi, I have a bunch of records within a directory where each one has this form: (example file1) 1 2 50 90 80 90 43512 98 0909 79869 -9 7878 33222 8787 9090 89898 7878 8989 7878 6767 89 89 78676 9898 000 7878 5656 5454 5454 and i want for all of these files to be... (3 Replies)
Discussion started by: amarn
3 Replies

5. Shell Programming and Scripting

extracting information from multiple files

Hello there, I am trying to extract (string) information ( a list words) from 4 files and then put the results into 1 file. Currently I am doing this using grep -f list.txt file1 . and repeat the process for the other 3 files. The reasons i am doing that (a) I do know how to code (b) each file... (4 Replies)
Discussion started by: houkto
4 Replies

6. UNIX for Dummies Questions & Answers

Reading Table name from a list of files in a Directory

Hi , I have searched through the forum but not able to find out any help :( i have a directory having lot of files which contains sql statemtns eg : file 1 contains select from table_name1 where ..................... select from table_name2 where .......... select from ... (3 Replies)
Discussion started by: Trendz
3 Replies

7. Shell Programming and Scripting

search information in multiple files and save in new files

hi everyone, im stuck in here with shell :) can you help me?? i have a directory with alot files (genbank files ... all ended in .gbk ) more than 1000 for sure ... and i want to read each one of them and search for some information and if i found the right one i save in new file with new... (6 Replies)
Discussion started by: andreia
6 Replies

8. UNIX for Dummies Questions & Answers

Load multiple files into a table

Hi, I need to load data from two files to a single table. My requirement is that I get two files in which a few column data are manadatory. These files are identified based on the file name. For example, I have two files ABCFile and BCDFile. ABCFile has mandatory data in column 3 and 4... (0 Replies)
Discussion started by: reshma15193
0 Replies

9. Shell Programming and Scripting

Apply command to all files in folder

Hi all! I have this command grep -E '^\To: |^\Date: |^\Subject: ' fileA.txt > fileA_1.txt && grep -v '^\To: |^\Date: |^\Subject: ' fileA.txt >> fileA_1.txt && rm fileA.txt && sed -i -e 's/\(Date: \|Subject: \|To: \)//g' fileA_1.txtHow do I apply it to all the files in the folder (each file has a... (7 Replies)
Discussion started by: guilliber
7 Replies

10. UNIX for Beginners Questions & Answers

How to apply the update statement in multiple servers on multiple dbs at a time .?

Hi , Can any please help the below requirement on all multiple servers and multiple dbs. update configuration set value='yes' ;1) the above statement apply on 31 Databases at a time on different Ip address eg : 10.104.1.12 (unix ip address ) the above ip box contains 4 db's eg : db... (2 Replies)
Discussion started by: venkat918
2 Replies
IO::Async::Routine(3pm) 				User Contributed Perl Documentation				   IO::Async::Routine(3pm)

NAME
"IO::Async::Routine" - execute code in an independent sub-process SYNOPSIS
use IO::Async::Routine; use IO::Async::Channel; use IO::Async::Loop; my $loop = IO::Async::Loop->new; my $nums_ch = IO::Async::Channel->new; my $ret_ch = IO::Async::Channel->new; my $routine = IO::Async::Routine->new( channels_in => [ $nums_ch ], channels_out => [ $ret_ch ], code => sub { my @nums = @{ $nums_ch->recv }; my $ret = 0; $ret += $_ for @nums; # Can only send references $ret_ch->send( $ret ); }, on_finish => sub { say "The routine aborted early - $_[-1]"; $loop->stop; }, ); $loop->add( $routine ); $nums_ch->send( [ 10, 20, 30 ] ); $ret_ch->recv( on_recv => sub { my ( $ch, $totalref ) = @_; say "The total of 10, 20, 30 is: $$totalref"; $loop->stop; } ); $loop->run; DESCRIPTION
This subclass of IO::Async::Process contains a body of code and executes it in a sub-process, allowing it to act independently of the main program. Once set up, all communication with the code happens by values passed into or out of the Routine via IO::Async::Channel objects. Because the code running inside the Routine runs within its own process, it is isolated from the rest of the program, in terms of memory, CPU time, and other resources, and perhaps most importantly in terms of control flow. The code contained within the Routine is free to make blocking calls without stalling the rest of the program. This makes it useful for using existing code which has no option not to block within an "IO::Async"-based program. To create asynchronous wrappers of functions that return a value based only on their arguments, and do not generally maintain state within the process it may be more convenient to use an IO::Async::Function instead, which uses an "IO::Async::Routine" to contain the body of the function and manages the Channels itself. PARAMETERS
The following named parameters may be passed to "new" or "configure": channels_in => ARRAY of IO::Async::Channel ARRAY reference of "IO::Async::Channel" objects to set up for passing values in to the Routine. channels_out => ARRAY of IO::Async::Channel ARRAY reference of "IO::Async::Channel" objects to set up for passing values out of the Routine. code => CODE CODE reference to the body of the Routine, to execute once the channels are set up. METHODS
This class provides no additional methods, other than those provided by IO::Async::Process. AUTHOR
Paul Evans <leonerd@leonerd.org.uk> perl v5.14.2 2012-10-24 IO::Async::Routine(3pm)
All times are GMT -4. The time now is 01:48 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy