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Top Forums Shell Programming and Scripting [awk] line by line processing the same file Post 302708761 by elixir_sinari on Tuesday 2nd of October 2012 07:20:21 AM
Old 10-02-2012
Quote:
Originally Posted by RudiC
But maybe that's desired?
If it is not desired, a slight tweak will do the trick.
Code:
awk '{atom[NR]=$3;xi[NR]=$6;yi[NR]=$7;zi[NR]=$8}
END{
for(i=1;i<=NR;i++)
 for(j=i+1;j<=NR;j++)
 {
  dist=sqrt((xi[i]-xi[j])^2 + (yi[i]-yi[j])^2 + (zi[i]-zi[j])^2)
  if(dist!=0 && dist <=cutoff)
   print atom[i],atom[j],dist
 }
}' cutoff="$DISTCUT" sub_oxy_high > oxy_dist_all

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IGAWK(1)							 Utility Commands							  IGAWK(1)

NAME
igawk - gawk with include files SYNOPSIS
igawk [ all gawk options ] -f program-file [ -- ] file ... igawk [ all gawk options ] [ -- ] program-text file ... DESCRIPTION
Igawk is a simple shell script that adds the ability to have ``include files'' to gawk(1). AWK programs for igawk are the same as for gawk, except that, in addition, you may have lines like @include getopt.awk in your program to include the file getopt.awk from either the current directory or one of the other directories in the search path. OPTIONS
See gawk(1) for a full description of the AWK language and the options that gawk supports. EXAMPLES
cat << EOF > test.awk @include getopt.awk BEGIN { while (getopt(ARGC, ARGV, "am:q") != -1) ... } EOF igawk -f test.awk SEE ALSO
gawk(1) Effective AWK Programming, Edition 1.0, published by the Free Software Foundation, 1995. AUTHOR
Arnold Robbins (arnold@skeeve.com). Free Software Foundation Nov 3 1999 IGAWK(1)
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