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Shell Programming and Scripting
How do you write this program/script?
Post 302708329 by sqa4life on Monday 1st of October 2012 11:36:00 AM
10-01-2012
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Output file template format
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<log_10_length_size>c</log_10_length_size>
Input_file_1 (eg. sample.txt)
SDFSDGDGSFGRTREREYWW
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Hello..
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LEARN ABOUT DEBIAN
cmtk-groupwise_init
groupwise_init(1) The Computational Morphometry Toolkit groupwise_init(1) NAME
groupwise_init - Affine initialization for groupwise registration SYNOPSIS
groupwise_init [options] image0 [image1 ...] DESCRIPTION
Compute initial affine alignment for a group of input images, which can be used as an input for groupwise registration OPTIONS
Global Toolkit Options (these are shared by all CMTK tools) --help Write list of basic command line options to standard output. --help-all Write complete list of basic and advanced command line options to standard output. --wiki Write list of command line options to standard output in MediaWiki markup. --man Write man page source in 'nroff' markup to standard output. --version Write toolkit version to standard output. --echo Write the current command line to standard output. --verbose-level <integer> Set verbosity level. --verbose, -v Increment verbosity level by 1 (deprecated; supported for backward compatibility). --threads <integer> Set maximum number of parallel threads (for POSIX threads and OpenMP). Main Options --template <string>, -t <string> Input filename for pre-defined template image. [Default: NONE] --output-root <string>, -O <string> Root directory for all output files. [Default: NONE] --output <string>, -o <string> Output filename for groupwise registration archive. [Default: groupwise.xforms ] --output-average <string> Output filename for registered average image. [Default: average.nii ] --average-cubic Use cubic (rather than linear) interpolation for average image. --no-output-average Do not write average image. --align-centers-of-mass Initially align centers of mass rather than centers of bounding boxes. --init-scales Initialize scale factors using first-order moments --center-template Center aligned images in template grid field of view. AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. Russakoff LICENSE
http://www.fsf.org/licensing/licenses/gpl.html BUGS
Report bugs at http://nitrc.org/projects/cmtk/ ACKNOWLEDGMENTS
From April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing). CMTK 2.2.2 Jul 20 2012 groupwise_init(1)