I have a file with Id which I want to compare it with other file to get the sequence of a particular id.
File 1 with ID
File 2 with sequence information
I want these two files to be compared by comapring ID in the first file with the ID encoded between the pipeline "||" in the second file. If it is same then print the complete sequence.
For example, Q676U5 is found in first file and in the second file. So in the output I should have something like this given below
Expected output
Thanks in advance
Hi,
My requirement is to search for a paritcular string from a group of .gz files and to print the lines containing that string and the name of the files in which that string is present.
Daily 500 odd .gz files will be generated in a directory(directory name will be in the form of... (4 Replies)
Dear All,
I have a log file like below
13:26:31 |152.22
13:27:31 |154.25
13:28:31 |154.78
13:29:31 |151.23
13:30:31 |145.63
13:31:31 |142.10
13:32:31 |145.45
where values will be there from 00:00 hrs to 23:59 hrs. I'm matching for last occurance of 23:59 and printing 1440 lines (grep... (4 Replies)
Dear all,
I have been trying to print an entire field, if the first line of the field is matching.
For example, my input looks something like this.
aaa ddd zzz
123 987 126
24 0.650 985
354 9864 0.32
0.333 4324 000
I am looking for a pattern,... (5 Replies)
I'm using this:
fgrep -f file1.txt file2.txt
To find lines in file1 that match patterns found in file2.
When I add -v:
egrep -v -f file1.txt file2.txt
It won't return non matching lines, I just get a blank.
Can anyone help?
PS. file1.txt contains 3 million lines...each string... (2 Replies)
Hi All,
I'm looking to use AWK to pattern match lines in XML file - Example patten for below sample would be /^<apple>/
The sample I wrote out is very basic compared to what I am actually working with but it will get me started
I would like to keep the matched line(s) unchanged but have them... (4 Replies)
Hi there,
I'm trying to use awk to print out the entire line that contains a match to a certain regex and then append some text,plus the match to the end of the line.
So far I have:
awk -F: '{print "RG:Z:" $2}' file
Which prints out the match I want plus the additional text, but I'm stuck... (3 Replies)
I have the below plain text file where i have some result, in order to mail that result in html table format I have written the below script and its working well. cat result.txt
Page 2015-01-01 2000
Colors 2015-02-01 3000
Landing 2015-03-02 4000
#!/bin/sh LOG=/tmp/maillog.txt... (1 Reply)
First I'd like to apologize if I opened a thread which is already open somewhere.
I did a bit of searching but could quite find what I was looking for, so I will try to explaing what I need.
I'm writing a script on our server, got to a point where I have two files with results. Example:
File1... (6 Replies)
Hi,
I need to match for the pattern '.py' in my file and print the word which contains.
For example:
cat testfile
a b 3 4.py 5 6
a b.py c.py 4 5 6 7 8
1.py 2.py 3 4 5 6
Expected output:
4.py
b.py c.py
1.py 2.py (3 Replies)
I apologize in advance, but I continue to have trouble searching for matches between two files and then printing portions of each to output in awk and would very much appreciate some help.
I have data as follows:
File1
PS012,002 PRQ 0 1 1 17 1 0 -1 3 2 1 2 -1 ... (7 Replies)