---------- Post updated at 04:21 AM ---------- Previous update was at 04:07 AM ----------
Hi Skrynesaver,
I am having a problem with the output. For every alternate record, the information is mising. An example of my output is given below. I do not have information for AC Q8IZP0. but it goes to the next record. This happens every alternate record.
Code:
ID ABI1_HUMAN Reviewed; 508 AA.
ID ABI1_HUMAN Reviewed; 508 AA.
AC Q8IZP0; A9Z1Y6; B4DQ58; O15147; O76049; O95060; Q5T2R3; Q5T2R4;
ID ABI3_HUMAN Reviewed; 366 AA.
AC Q9P2A4; C9IZN8; Q9H0P6;
DT 19-JUL-2004, integrated into UniProtKB/Swiss-Prot.
DT 18-MAY-2010, sequence version 2.
DT 05-SEP-2012, entry version 93.
DE RecName: Full=ABI gene family member 3;
DE AltName: Full=New molecule including SH3;
DE Short=Nesh;
GN Name=ABI3; Synonyms=NESH;
Hi,
I want to calculate the number of pipe delimiters in a file for all lines seperately.
For eg:i have a file Project.txt
Mohit|chawla|123|678
File1|File2|345|767|678
And my file contains many lines like this
it shd give me the output as
4
5
or give me the output for all the... (0 Replies)
Hello guys
I want to retrieve two data from a file, like this:
bash-2.03$ cat numtest
123456
123457
bash-2.03$ more ./test_num
#!/bin/bash
num1=
num2=
cnt=1
while read x
do
num${cnt}=$x
cnt=$(($cnt+1))
done <$1
echo $num1 "\n" $num2
But when i executed this script, error... (2 Replies)
Hi Everyone,
I will try to explain my question please forgive my english here.
I am looking for shell script or command that can compare data in the files.
I have 50 files in one directory test1 test2 test3 ....so on.
I want to compare data in each files with each other and output each... (4 Replies)
hi all,
In an mp3 file , data is arranged in sequence of header and data ,how to retrieve data between two headers. Is the data between two headers fixed? because as per theory it says 1152 samples will be there , but dont knw how many bits one sample correspond to?
it would help if any c... (2 Replies)
How to write a shell script to retrieve datas from database after that this database are redirect to a excell sheet and then i got a mail that gives details about the database with the column name and data..
I m using oracle 9i...
Thanks,
Anup Das (2 Replies)
Hi Guys,
Please help me with my problem here:
I have a source file:
1212 23232 343434 ASAS1 4
3212 23232 343434 ASAS2 4
3234 23232 343434 QWQW1 4
1134 23232 343434 QWQW2 4
3212 23232 343434 QWQW3 4
and a mapping... (4 Replies)
Hi,
I need to compare a file with its contents matching to that of another file(filename , received date and record count).
Lets say has File A original data
Ex -
1,abc,1234
2,bcd,4567
3,cde,8901
and File B has details of File A
Ex-
FILEA.TXT|06/17|2010|3
(filename)|(received... (18 Replies)
I am having trouble matching *two* strings from one file anywhere in a line of a second file, and could use some help getting this figured out. My preference would be to use grep for this because I would like to take advantage of its -A option. The latter is due to the fact that I would like both... (2 Replies)
Discussion started by: jvoot
2 Replies
LEARN ABOUT DEBIAN
swiss::dts
SWISS::DTs(3pm) User Contributed Perl Documentation SWISS::DTs(3pm)Name
SWISS::DTs
Description
SWISS::DTs represents the DT lines within an Swiss-Prot + TrEMBL entry as specified in the user manual
http://www.expasy.org/sprot/userman.html .
Inherits from
SWISS::BaseClass.pm
Attributes
"CREATED_date"
Creation date
"ANN_date"
Last annotation update
"SQ_date"
Last Sequence update
"CREATED_rel"
Created for release
"ANN_rel"
Last annotation for release
"SQ_rel"
Last sequence update for release
"ANN_version"
Version number for entry annotation
"SQ_version"
Version number for sequence
Methods
Standard methods
new
fromText
toText
sort
Writing methods
set_Created ($date, $release)
set_AnnotationUpdate ($date, $release[, $version])
set_SequenceUpdate ($date, $release[, $version])
TRANSITION
The format of the DT line will change in early 2004 from:
DT 01-JUL-1993 (Rel. 26, Created)
DT 01-JUL-1993 (Rel. 26, Last sequence update)
DT 28-FEB-2003 (Rel. 41, Last annotation update)
to:
DT 01-JUL-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1993, sequence version 36.
DT 28-FEB-2003, entry version 54.
This module supports both formats. To convert an entry from the old to the new format, do:
$entry->DTs->CREATED_rel("UniProtKB/Swiss-Prot");
$entry->DTs->ANN_version(54);
$entry->DTs->SQ_version(36);
perl v5.10.1 2008-07-11 SWISS::DTs(3pm)