09-13-2012
silly mistake by me for grep
my file names in first column look like this
count/james-james-mark |
count/james-mark-mark |
so basically count/$X-$Y-$Z
for example one of my files has 60 lines with values looking like this
count/james-james-mark | 3.5 | 2.25 | 2.5 | 2.25 | 2.33333 | 3.55556 | 3.33333 | 2.88889 |
count/peter-peter-peter | 3.33333 | 4.22222 | 1 | 0 | 2 | 0 | 4 | 0 |
sp 60 out of 125 can be covers with these lines and the rest should be the pattern and NAs
Last edited by A-V; 09-13-2012 at 10:44 AM..
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi guys,
Wish you all a very Happy New Year!!!.
Thanks in advance.
I want to read a file and merge the rows which have '\n' in it.
The rows could be > 50,000 bytes. The script should merge all the rows till the next row starts with word 'Type|'.
ex.... (24 Replies)
Discussion started by: ssachins
24 Replies
2. Shell Programming and Scripting
Hi,
I Have a directory(views) and i have 100 .sql files in the same directory.
I need to be add 8 rows in each file.
The format 8 rows has like:
grant select on file_name to User1
/
grant select on file_name to User2
/
grant select on file_name to User3
/
grant select on file_name to... (1 Reply)
Discussion started by: koti_rama
1 Replies
3. Shell Programming and Scripting
A unix script generates a file "1.csv". I use the following to email this as an excel sheet.
/usr/bin/uuencode /tmp/1.csv 1.csv > $PATH/attachment.txt
mailx -r abc@domain.com -s "Subject" myself@domain.com < $PATH/attachment.txtI get the file as CSV in the email and everything is fine except... (9 Replies)
Discussion started by: girish1428
9 Replies
4. Shell Programming and Scripting
I have the following space-delimited input:
1 11.785710 117.857100
1 15 150
1 20 200
1 25 250
3 2.142855 21.428550
3 25 250
22 1.071435 10.714350
The first field is the ID number, the second field is the percentage of the total points that the person has and the third column is the number... (3 Replies)
Discussion started by: mdlloyd7
3 Replies
5. UNIX for Dummies Questions & Answers
Hi,
I have to text files that I want to merge by the first column. The values in the first column pretty much match for the first part. However there are some values that are present in column 1 and not present in column 2 or vice versa. For such values I would like to substitute X for the... (9 Replies)
Discussion started by: evelibertine
9 Replies
6. UNIX for Dummies Questions & Answers
I have 2 files,
file01= 7 columns, row unknown (but few)
file02= 7 columns, row unknown (but many)
now I want to create an output with the first field that is shared in both of them and then subtract the results from the rest of the fields and print there
e.g.
file 01
James|0|50|25|10|50|30... (1 Reply)
Discussion started by: A-V
1 Replies
7. Shell Programming and Scripting
Hi..
My requirement is simple but unable to get that..
File 1 :
3 415 A G
4 421 G .
39 421 G A
2 421 G A,C
41 427 A .
4 427 A C
42 436 G .
3 436 G C
43 445 C .
2 445 C T
41 447 A .
Output (4 Replies)
Discussion started by: empyrean
4 Replies
8. Shell Programming and Scripting
Hello,
I have a data format as follows:
Ind1 0 1 2
Ind1 0 2 1
Ind2 1 1 0
Ind2 2 2 0
I want to use AWK to have this output:
Ind1 00 12 21
Ind2 12 12 00
That is to merge each two rows with the same row names.
Thank you very much in advance for your help. (8 Replies)
Discussion started by: Homa
8 Replies
9. Shell Programming and Scripting
Hi All,
I have the below file where I want the lines to merged based on a pattern.
AFTER
CMMILAOJ
CMMILAAJ
AFTER
CMDROPEJ
CMMIMVIJ
CMMIRNTJ
CMMIRNRJ
CMMIRNWJ
CMMIRNAJ
CMMIRNDJ
AFTER
CMMIRNTJ
CMMIRNRJ
CMMIRNWJ (4 Replies)
Discussion started by: varun22486
4 Replies
10. UNIX for Beginners Questions & Answers
Hellow,
I have a tab-delimited file with 3 columns :
BINPACKER.13259.1.p2 SSF48239
BINPACKER.13259.1.p2 PF13243
BINPACKER.13259.1.p2 G3DSA:1.50.10.20
BINPACKER.13259.2.p2 SSF48239
BINPACKER.13259.2.p2 PF13243
BINPACKER.13259.2.p2 G3DSA:1.50.10.20... (7 Replies)
Discussion started by: anjaliANJALI
7 Replies
LEARN ABOUT CENTOS
create_foreign_table
CREATE FOREIGN
TABLE(7) PostgreSQL 9.2.7 Documentation CREATE FOREIGN TABLE(7)
NAME
CREATE_FOREIGN_TABLE - define a new foreign table
SYNOPSIS
CREATE FOREIGN TABLE [ IF NOT EXISTS ] table_name ( [
{ column_name data_type [ OPTIONS ( option 'value' [, ... ] ) ] [ NULL | NOT NULL ] }
[, ... ]
] )
SERVER server_name
[ OPTIONS ( option 'value' [, ... ] ) ]
DESCRIPTION
CREATE FOREIGN TABLE will create a new foreign table in the current database. The table will be owned by the user issuing the command.
If a schema name is given (for example, CREATE FOREIGN TABLE myschema.mytable ...) then the table is created in the specified schema.
Otherwise it is created in the current schema. The name of the foreign table must be distinct from the name of any other foreign table,
table, sequence, index, or view in the same schema.
CREATE FOREIGN TABLE also automatically creates a data type that represents the composite type corresponding to one row of the foreign
table. Therefore, foreign tables cannot have the same name as any existing data type in the same schema.
To be able to create a table, you must have USAGE privilege on all column types.
PARAMETERS
IF NOT EXISTS
Do not throw an error if a relation with the same name already exists. A notice is issued in this case. Note that there is no guarantee
that the existing relation is anything like the one that would have been created.
table_name
The name (optionally schema-qualified) of the table to be created.
column_name
The name of a column to be created in the new table.
data_type
The data type of the column. This can include array specifiers. For more information on the data types supported by PostgreSQL, refer
to Chapter 8, Data Types, in the documentation.
NOT NULL
The column is not allowed to contain null values.
NULL
The column is allowed to contain null values. This is the default.
This clause is only provided for compatibility with non-standard SQL databases. Its use is discouraged in new applications.
server_name
The name of an existing server for the foreign table.
OPTIONS ( option 'value' [, ...] )
Options to be associated with the new foreign table or one of its columns. The allowed option names and values are specific to each
foreign data wrapper and are validated using the foreign-data wrapper's validator function. Duplicate option names are not allowed
(although it's OK for a table option and a column option to have the same name).
EXAMPLES
Create foreign table films with film_server:
CREATE FOREIGN TABLE films (
code char(5) NOT NULL,
title varchar(40) NOT NULL,
did integer NOT NULL,
date_prod date,
kind varchar(10),
len interval hour to minute
)
SERVER film_server;
COMPATIBILITY
The CREATE FOREIGN TABLE command largely conforms to the SQL standard; however, much as with CREATE TABLE, NULL constraints and zero-column
foreign tables are permitted.
SEE ALSO
ALTER FOREIGN TABLE (ALTER_FOREIGN_TABLE(7)), DROP FOREIGN TABLE (DROP_FOREIGN_TABLE(7)), CREATE TABLE (CREATE_TABLE(7)), CREATE SERVER
(CREATE_SERVER(7))
PostgreSQL 9.2.7 2014-02-17 CREATE FOREIGN TABLE(7)