Sponsored Content
Top Forums Shell Programming and Scripting fuzzy sequence match in a text file Post 302700027 by Chubler_XL on Wednesday 12th of September 2012 09:35:35 PM
Old 09-12-2012
Apologies, this site seem focused on smallest number of chars, not clarity.

Code:
if(skip != 0 || $2+0 == day + 2) skip=1
 
# or
if (skip == 0) {
    if ($2+0 == day + 2) skip =1
}

Code:
if(skip ==0) max=day+2 else max=day+1


Last edited by Chubler_XL; 09-12-2012 at 10:41 PM..
This User Gave Thanks to Chubler_XL For This Post:
 

10 More Discussions You Might Find Interesting

1. Programming

Fuzzy Match Logic for Numerical Values

I have searched the internet (including these forums) and perhaps I'm not using the right wording. What I'm looking for is a function (preferably C) that analyzes the similitude of two numerical or near-numerical values, and returns either a true/false (match/nomatch) or a return code that... (4 Replies)
Discussion started by: marcus121
4 Replies

2. Shell Programming and Scripting

match text from two files and write to a third file

Hi all I have two files X.txt and Y.txt. Both file contains same number of sentences. The content of X.txt is The filter described above may be combined. and the content of Y.txt is The filter describ+ed above may be combin+ed. Some of the words are separated with "+"... (2 Replies)
Discussion started by: my_Perl
2 Replies

3. Shell Programming and Scripting

Insert text file only after the first match with SED

Hello, I'm new in Shell scripting but i should write a script, which inserts the license header out of a txt-File into the files in our Projekt. For the Java classes it runs without Problems but for XML files not. At xml-files i have to put the license Header after the xml-Header (?xml... (1 Reply)
Discussion started by: PhoenixONE
1 Replies

4. Shell Programming and Scripting

find common entries and match the number with long sequence and cut that sequence in output

Hi all, I have a file like this ID 3BP5L_HUMAN Reviewed; 393 AA. AC Q7L8J4; Q96FI5; Q9BQH8; Q9C0E3; DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot. DT 05-JUL-2004, sequence version 1. DT 05-SEP-2012, entry version 71. FT COILED 59 140 ... (1 Reply)
Discussion started by: manigrover
1 Replies

5. Shell Programming and Scripting

Inserting IDs from a text file into a sequence alignment file

Hi, I have one file with one column and several hundred entries File1: NA1 NA2 NA3And now I need to run a command within a mapping aligner tool to insert these sample names into a sequence alignment file (SAM) such that they look like this @RG ID:Library1 SM:NA1 PL:Illumina ... (7 Replies)
Discussion started by: nans
7 Replies

6. Shell Programming and Scripting

Match text from file 1 to file 2 and return specific text

I hope this makes sense and is possible. I am trying to match $1 of panel_genes.txt with $3 of RefSeqGene.txt and when a match is found the value in $6 of RefSeqGene.txt Example: ACTA2 is $1 of panel_genes.txt ACTA2 NM_001613.2 ACTA2 NM_001141945.1 awk 'FNR==NR {... (4 Replies)
Discussion started by: cmccabe
4 Replies

7. Shell Programming and Scripting

Display match or no match and write a text file to a directory

The below bash connects to a site, downloads a file, searches that file based of user input - could be multiple (all that seems to work). What I am not able to figure out is how to display on the screen match found or no match found" and write a file to a directory (C:\Users\cmccabe\Desktop\wget)... (4 Replies)
Discussion started by: cmccabe
4 Replies

8. Shell Programming and Scripting

Match all lines in file where specific text pattern is less than

In the below file I am trying to grep or similar, all lines where only AF= is less than 0.4.. Thank you :). grep grep "AF=" ,+ .4 file file 12 112036782 . T C 34.0248 PASS ... (3 Replies)
Discussion started by: cmccabe
3 Replies

9. Shell Programming and Scripting

Insert text after match in XML file

Having a little trouble getting this to work just right. I have xml files that i want to split some data. I have 2 <name> tags within the file I would like to take only the first tag and split the data. tag example. From this. TAB<Name>smith, john</Name> to TAB<Name>smith,... (8 Replies)
Discussion started by: whegra
8 Replies

10. Shell Programming and Scripting

Match text to lines in a file, iterate backwards until text or text substring matches, print to file

hi all, trying this using shell/bash with sed/awk/grep I have two files, one containing one column, the other containing multiple columns (comma delimited). file1.txt abc12345 def12345 ghi54321 ... file2.txt abc1,text1,texta abc,text2,textb def123,text3,textc gh,text4,textd... (6 Replies)
Discussion started by: shogun1970
6 Replies
XOSD(1) 						      General Commands Manual							   XOSD(1)

NAME
osd_cat - X on-screen file displayer SYNOPSIS
osd_cat [OPTION] [FILE]... osd_cat -b percentage|slider [OPTION] DESCRIPTION
Display FILE, or standard input, on X screen. -p, --pos=POS This option tells osd_cat where to display the text. POS can be top, middle, or bottom. The default is top. -o, --offset=OFFSET This option specifies the offset from the top or bottom of screen the text is displayed. The default is 0. -A, --align=ALIGN This option tells osd_cat where to display the text. ALIGN can be left, right or center. The default is left. -i, --indent=OFFSET This option specifies the INDENT from the left of screen the text is displayed. The default is 0. -f, --font=FONT This option specifies the FONT to be used for displaying the text. The default is fixed. -c, --color=COLOR This option specifies the COLOR to be used for displaying the text. The default is red. -d, --delay=TIME This option specifies the number of seconds the text is displayed. The default is 5 seconds. -l, --lines=LINES This option specifies the number of LINES to scroll the display over. The default is 5. -s, --shadow=OFFSET This option specifies the OFFSET of the text shadow. The default is 0, which means no text shadow is created. -S, --shadowcolour=COLOUR This option specifies the COLOUR of the text shadow. The default is black. -O, --outline=WIDTH This option specifies the WIDTH of the text outline. The default is 0, which is no outline. -u, --outlinecolour=COLOUR This option specifies the COLOUR of the text outline. The default is black. -a, --age[=SCROLL_AGE] This option affects screen redrawing. If SCROLL_AGE seconds pass before a new line is ready (for example, you're reading from a pipe), all lines are cleared at once instead of being scrolled off as new lines replace old lines. The default is 0. When no SCROLL_AGE is explicitly given, the current value from DELAY is used. -w, --wait This option also affects screen redrawing. When there is data ready to be put on screen, this option will cause osd_cat to wait until the display is clear. An alternative to scrolling. -b, --barmode=TYPE Lets you display a percentage or slider bar instead of just text. TYPE may be percentage or slider. In this mode no text is read from any file, but the following options can be used: -P, --percentage=PERCENTAGE This option specified the position of the percentage / slider bar. PERCENTAGE may be in the range from 0 to 100, the default is 50. -T, --text=TEXT This option specifies an optional TEXT which gets displayed above the percentage bar. The default is empty, so no additional text is displayed. -h, --help display help (which is often more up to date) and exit With no FILE, or when FILE is -, read standard input. AUTHOR
Martijn van de Streek <martijn@foodfight.org>, Some patching done by Malcolm Valentine <farkit@iprimus.com.au> and Tim Wright <tim@ignavus.net>. xosd was written by Andre Renaud <andre@ignavus.net> and is maintained by Tim Wright <tim@ignavus.net> SEE ALSO
More information on the X OSD Library and its author can be found on http://www.ignavus.net/software.html <http://www.ignavus.net/software.html> COPYRIGHT
It is distributed under the GNU General Public License. X OSD cat January 2001 XOSD(1)
All times are GMT -4. The time now is 02:44 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy